Miyakogusa Predicted Gene

Lj0g3v0154099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154099.1 Non Chatacterized Hit- tr|I1HUU1|I1HUU1_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,54.12,4e-19,
,NODE_44741_length_509_cov_240.966599.path2.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g00310.1                                                       186   4e-48
Glyma02g00240.1                                                       104   2e-23
Glyma19g45350.1                                                       103   5e-23
Glyma10g00310.2                                                       101   2e-22

>Glyma10g00310.1 
          Length = 208

 Score =  186 bits (473), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 96/136 (70%), Positives = 111/136 (81%), Gaps = 9/136 (6%)

Query: 1   MALCSSLSLLPPITSQPKLTSTKSFSSPIPPNLHGLLTKTN---RFSLKAGFNEIEPDLN 57
           MALCSSLSL+ PI    KLTS KSF SP P + HG+L K N   RF LKAGFNEIEPDL+
Sbjct: 1   MALCSSLSLVSPI----KLTS-KSFLSPTPVSWHGILIKNNTSTRFLLKAGFNEIEPDLS 55

Query: 58  EDPRDQFALNSIDSEDFEYGIFDGHHTYYEGEHEKGTFWGSIAEDIAATEPPTGFQGIIS 117
           EDPRDQFA N +D++DF YGI+D HHTY+EGE +KGTFWGSI E++A  EPPTGFQG+IS
Sbjct: 56  EDPRDQFATNGVDADDFVYGIYDDHHTYHEGE-QKGTFWGSIKEEMAEAEPPTGFQGLIS 114

Query: 118 WLFPPAIAAGVFFDVP 133
           WLFPPAIA GV+F+VP
Sbjct: 115 WLFPPAIALGVYFNVP 130


>Glyma02g00240.1 
          Length = 167

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/63 (76%), Positives = 56/63 (88%), Gaps = 1/63 (1%)

Query: 71  SEDFEYGIFDGHHTYYEGEHEKGTFWGSIAEDIAATEPPTGFQGIISWLFPPAIAAGVFF 130
            +DF YGI+D HHTY+EGE +KGTFWGSIAE++A  EPPTGFQGIISWLFPPAIA GV+F
Sbjct: 28  QDDFVYGIYDDHHTYHEGE-QKGTFWGSIAEEMAVAEPPTGFQGIISWLFPPAIALGVYF 86

Query: 131 DVP 133
           +VP
Sbjct: 87  NVP 89


>Glyma19g45350.1 
          Length = 164

 Score =  103 bits (257), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 47/58 (81%), Positives = 54/58 (93%), Gaps = 1/58 (1%)

Query: 76  YGIFDGHHTYYEGEHEKGTFWGSIAEDIAATEPPTGFQGIISWLFPPAIAAGVFFDVP 133
           YGI+D HHTY+EGE +KGTFWGSIAE++AA EPPTGFQGIISWLFPPAIA GV+F+VP
Sbjct: 26  YGIYDDHHTYHEGE-QKGTFWGSIAEEMAAAEPPTGFQGIISWLFPPAIALGVYFNVP 82


>Glyma10g00310.2 
          Length = 147

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 55/63 (87%), Gaps = 1/63 (1%)

Query: 71  SEDFEYGIFDGHHTYYEGEHEKGTFWGSIAEDIAATEPPTGFQGIISWLFPPAIAAGVFF 130
            +DF YGI+D HHTY+EGE +KGTFWGSI E++A  EPPTGFQG+ISWLFPPAIA GV+F
Sbjct: 8   QDDFVYGIYDDHHTYHEGE-QKGTFWGSIKEEMAEAEPPTGFQGLISWLFPPAIALGVYF 66

Query: 131 DVP 133
           +VP
Sbjct: 67  NVP 69