Miyakogusa Predicted Gene

Lj0g3v0153829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0153829.1 tr|Q0DFK5|Q0DFK5_ORYSJ Os05g0585400 protein
OS=Oryza sativa subsp. japonica GN=Os05g0585400 PE=2 SV=,30.77,4e-17,
,CUFF.9519.1
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g03350.1                                                       352   2e-97
Glyma07g06790.1                                                       351   3e-97
Glyma19g44080.1                                                       221   4e-58
Glyma03g41490.1                                                       159   2e-39
Glyma04g41310.1                                                        51   8e-07
Glyma06g13550.2                                                        50   1e-06
Glyma06g13550.1                                                        50   1e-06

>Glyma16g03350.1 
          Length = 311

 Score =  352 bits (903), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 170/208 (81%), Positives = 183/208 (87%), Gaps = 2/208 (0%)

Query: 1   MDLRVSTVNQKLLTCKIYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPHIQIDA 60
           MDL+V+T+NQKLLTC+IYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSP IQIDA
Sbjct: 102 MDLKVATINQKLLTCQIYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPQIQIDA 161

Query: 61  KQNPFQTRTRFQSSGTPASKTLSWHLASETKSTLKGTLQA--SPNIDTPKFTAKASGVFH 118
           +QNPFQTRTRFQSSGTPA+KTLSWHLASETKSTLKG+  A  SPN + PKF+AKASGVFH
Sbjct: 162 RQNPFQTRTRFQSSGTPAAKTLSWHLASETKSTLKGSSHASPSPNTENPKFSAKASGVFH 221

Query: 119 LLDNEERTGMKFSPAQTHLQNGVPTSSIPMQNFGGTHRDALEGSRPLTGFRSFDNPNRHE 178
           LLDNEE T MK SPAQ +  NGVPTSS PM   GGT +DALEGS+PLT FRSFD  NR E
Sbjct: 222 LLDNEENTWMKSSPAQIYFPNGVPTSSTPMHTLGGTGKDALEGSKPLTAFRSFDYQNRRE 281

Query: 179 TVQTPGRSRSVLSAFFVKQKTPKLKAGG 206
           TVQ P RS+SVLSAFFVKQKTPKLKAG 
Sbjct: 282 TVQVPTRSKSVLSAFFVKQKTPKLKAGS 309


>Glyma07g06790.1 
          Length = 311

 Score =  351 bits (900), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 169/208 (81%), Positives = 182/208 (87%), Gaps = 2/208 (0%)

Query: 1   MDLRVSTVNQKLLTCKIYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPHIQIDA 60
           MDL+V+T+NQKLLTC+IYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPHIQIDA
Sbjct: 102 MDLKVATINQKLLTCQIYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPHIQIDA 161

Query: 61  KQNPFQTRTRFQSSGTPASKTLSWHLASETKSTLKGTLQA--SPNIDTPKFTAKASGVFH 118
           +QNPFQTRTRFQSSGTPA+KTLSWHLASETKSTLKG+  A  SPNI+ PKF+ KASGVFH
Sbjct: 162 RQNPFQTRTRFQSSGTPAAKTLSWHLASETKSTLKGSSHASPSPNIENPKFSGKASGVFH 221

Query: 119 LLDNEERTGMKFSPAQTHLQNGVPTSSIPMQNFGGTHRDALEGSRPLTGFRSFDNPNRHE 178
           LLDNEE T MK SPAQ H  NGV TSS PM   GGT +DALEGS+P T FRSFDN NR E
Sbjct: 222 LLDNEENTWMKSSPAQIHFPNGVSTSSTPMHTLGGTRKDALEGSKPFTTFRSFDNQNRRE 281

Query: 179 TVQTPGRSRSVLSAFFVKQKTPKLKAGG 206
           TVQ P RS+S+LSAFFVKQKTPKLKA  
Sbjct: 282 TVQVPTRSKSMLSAFFVKQKTPKLKASS 309


>Glyma19g44080.1 
          Length = 325

 Score =  221 bits (563), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/239 (53%), Positives = 146/239 (61%), Gaps = 34/239 (14%)

Query: 1   MDLRVSTVNQKLLTCKIYTDKEGLRQQQLLAFIPRHHKHYILPN---------------- 44
           MDL+VST+NQ+LLTC +YTDKEGLRQQQLLAFIPRHHKHYILP+                
Sbjct: 84  MDLKVSTLNQRLLTCHMYTDKEGLRQQQLLAFIPRHHKHYILPSFLMIPSIKRYILSHTE 143

Query: 45  -SVNKKVHFSPHI----QIDAKQNPFQTR------------TRFQSSGTPASKTLSWHLA 87
             V  K+HF P +    Q+  K  P++                F   GTP SKTLSWHLA
Sbjct: 144 RLVQDKIHFKPELVFILQVCWKIVPYEVFGFDVCSPPLPLFLFFWFGGTPISKTLSWHLA 203

Query: 88  SETKSTLKGTL-QASPNIDTPKFTAKASGVFHLLDNEERTGMKFSPAQTHLQNGVPTSSI 146
           SETK TLK    + S N    KF+AK SGVFHLL +E  T MK S AQ HL NGVPTS  
Sbjct: 204 SETKFTLKKQASRTSKNAKDSKFSAKTSGVFHLLGSEGSTRMKTSAAQPHLANGVPTSGA 263

Query: 147 PMQNFGGTHRDALEGSRPLTGFRSFDNPNRHETVQTPGRSRSVLSAFFVKQKTPKLKAG 205
             Q  G T RDAL+ S+PLT + SFD+ N  E VQ   RS+SVLS+F VKQ   KLKAG
Sbjct: 264 ATQTLGATSRDALKRSKPLTAYGSFDDRNGREAVQVHTRSKSVLSSFLVKQAAAKLKAG 322


>Glyma03g41490.1 
          Length = 250

 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/183 (51%), Positives = 106/183 (57%), Gaps = 28/183 (15%)

Query: 1   MDLRVSTVNQKLLTCKIYTDKEGLRQQQLLAFIPRHHKHYILP----------------- 43
           MDL+VST+NQ+LLT  +YTDKEGLRQQQLLAFIPRHHKHYILP                 
Sbjct: 69  MDLKVSTLNQRLLTWHMYTDKEGLRQQQLLAFIPRHHKHYILPKLIIDSTDLGFLMIPSI 128

Query: 44  ---------NSVNKKVHFSPHIQIDAKQNPFQTRTRFQSSGTPASKTLSWHLASETKSTL 94
                      V  K+HF P +    +   ++        GTP SKTLSWHLASETKSTL
Sbjct: 129 KRYISSHTEKLVQDKIHFKPELVFILQVCCWKIVPS-GVFGTPISKTLSWHLASETKSTL 187

Query: 95  KG-TLQASPNIDTPKFTAKASGVFHLLDNEERTGMKFSPAQTHLQNGVPTSSIPMQNFGG 153
           K  T + S N    KF  K SGVFHLLD+E  T MK S AQ HL NGVPTS    Q  G 
Sbjct: 188 KKQTSRTSKNTKDSKFYKKISGVFHLLDSEGSTRMKTSAAQPHLTNGVPTSGAATQTMGA 247

Query: 154 THR 156
           T R
Sbjct: 248 TGR 250


>Glyma04g41310.1 
          Length = 336

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%)

Query: 2   DLRVSTVNQKLLTCKIYTDKEGLRQQQLLAFIPRHHKHYILP 43
           +LRVS + Q++ TC  Y D+EG  QQ L+   P++HK YILP
Sbjct: 105 ELRVSCIEQRIKTCHEYMDREGRTQQSLVISTPKYHKRYILP 146


>Glyma06g13550.2 
          Length = 326

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 2   DLRVSTVNQKLLTCKIYTDKEGLRQQQLLAFIPRHHKHYILP 43
           +LRVS + Q++ TC  Y D EG  QQ L+   P++HK YILP
Sbjct: 105 ELRVSCIEQRIKTCHEYMDHEGRTQQSLVISTPKYHKRYILP 146


>Glyma06g13550.1 
          Length = 326

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%)

Query: 2   DLRVSTVNQKLLTCKIYTDKEGLRQQQLLAFIPRHHKHYILP 43
           +LRVS + Q++ TC  Y D EG  QQ L+   P++HK YILP
Sbjct: 105 ELRVSCIEQRIKTCHEYMDHEGRTQQSLVISTPKYHKRYILP 146