Miyakogusa Predicted Gene
- Lj0g3v0152989.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0152989.1 Non Chatacterized Hit- tr|I1NZ98|I1NZ98_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,53.93,2e-19,Dynein_light,Dynein light chain, type 1/2; DLC,Dynein
light chain, type 1/2; no description,Dynein l,CUFF.9450.1
(110 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g42180.1 201 1e-52
Glyma12g16250.1 119 7e-28
Glyma08g04230.1 109 5e-25
Glyma15g01900.1 103 5e-23
Glyma13g43410.1 100 3e-22
Glyma07g16690.1 97 5e-21
Glyma15g16050.1 91 3e-19
Glyma15g16060.1 91 3e-19
Glyma09g04830.1 91 4e-19
Glyma17g12490.1 86 7e-18
Glyma12g34730.1 86 9e-18
Glyma05g01580.1 82 1e-16
Glyma17g10320.1 82 1e-16
Glyma16g26790.1 75 2e-14
Glyma12g35200.1 75 2e-14
Glyma02g07720.1 74 3e-14
Glyma05g34910.1 74 5e-14
Glyma08g04800.1 72 9e-14
Glyma13g35300.1 71 2e-13
Glyma08g00340.1 68 2e-12
Glyma09g04820.1 64 4e-11
Glyma15g16060.2 62 1e-10
>Glyma06g42180.1
Length = 109
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/110 (89%), Positives = 105/110 (95%), Gaps = 1/110 (0%)
Query: 1 MLEGKAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIV 60
MLEGKAVIGETDMLQTMQQ+A+DLASKALDFFDVTEAI+IARFIKKEFDRMHGPGWQCIV
Sbjct: 1 MLEGKAVIGETDMLQTMQQDAMDLASKALDFFDVTEAIKIARFIKKEFDRMHGPGWQCIV 60
Query: 61 GTDFGSFVTHCCGCFIYFCIGSLAILLFRGSADQEAKENHFSAALEAARA 110
GTDFGSFVTHCCGCFIYFC+G+LAILLFRGSA EA EN FS AL+AA+A
Sbjct: 61 GTDFGSFVTHCCGCFIYFCLGNLAILLFRGSAAPEAHENRFS-ALDAAKA 109
>Glyma12g16250.1
Length = 59
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/59 (94%), Positives = 58/59 (98%)
Query: 1 MLEGKAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCI 59
MLEGKAVIGETDMLQTMQQ+A DLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQC+
Sbjct: 1 MLEGKAVIGETDMLQTMQQDATDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCM 59
>Glyma08g04230.1
Length = 93
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%)
Query: 1 MLEGKAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIV 60
MLEGKA++ ETDM MQ +A+ AS+ALD +DV + I IA IKKEFD ++G GWQC+V
Sbjct: 1 MLEGKAMVKETDMSTKMQIHAMASASQALDLYDVYDCISIAAHIKKEFDSVYGNGWQCVV 60
Query: 61 GTDFGSFVTHCCGCFIYFCIGSLAILLFRGSA 92
G++FG + TH G FIYF + +L L+F+G++
Sbjct: 61 GSNFGCYFTHSSGTFIYFALATLNFLIFKGTS 92
>Glyma15g01900.1
Length = 95
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%)
Query: 1 MLEGKAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIV 60
MLEGKAVI +TDM MQ A+ AS+ALD +DV + IA IKKEFD +G GWQC+V
Sbjct: 1 MLEGKAVIEDTDMPDKMQIQAMASASEALDLYDVFDCTSIAAHIKKEFDTKYGSGWQCVV 60
Query: 61 GTDFGSFVTHCCGCFIYFCIGSLAILLFRGSA 92
G+ FG F TH G F+YF + +L L+F+G++
Sbjct: 61 GSSFGCFFTHSKGTFVYFTLETLNFLIFKGAS 92
>Glyma13g43410.1
Length = 95
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 1 MLEGKAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIV 60
MLEGKAVI +TDM MQ A+ A +ALD +DV + IA IKKEFD +G GWQC+V
Sbjct: 1 MLEGKAVIEDTDMPDKMQIQAMASAYEALDLYDVFDCTSIAAHIKKEFDTKYGSGWQCVV 60
Query: 61 GTDFGSFVTHCCGCFIYFCIGSLAILLFRGSA 92
G+ FG F TH G F+YF + +L L+F+G++
Sbjct: 61 GSSFGCFFTHSKGTFVYFTLETLNFLIFKGAS 92
>Glyma07g16690.1
Length = 130
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 66/109 (60%)
Query: 1 MLEGKAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIV 60
MLEGKAV+ ETDM + MQ ++LA +ALD +V++ IA FIK++ D +GP W +V
Sbjct: 19 MLEGKAVVRETDMPEGMQSYVMELAHQALDAHEVSDCQSIAHFIKQKLDEAYGPAWNSVV 78
Query: 61 GTDFGSFVTHCCGCFIYFCIGSLAILLFRGSADQEAKENHFSAALEAAR 109
G DFGS +TH CG FI+F + + L+F+ + L+ AR
Sbjct: 79 GKDFGSCITHLCGSFIFFRVEMMEFLIFKDGKNFTESREEAIGVLQKAR 127
>Glyma15g16050.1
Length = 122
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 5 KAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDF 64
K +I DM+ MQ+ A+D+A A + ++V + ++A IKKEFD+ HGP W CIVG +F
Sbjct: 38 KVIIKSADMIPDMQKEAVDIAVAAFEKYNVEK--DVAEQIKKEFDKRHGPTWHCIVGRNF 95
Query: 65 GSFVTHCCGCFIYFCIGSLAILLFRG 90
GS+VTH F+YF + A+LLF+
Sbjct: 96 GSYVTHETNHFVYFYLDQKAVLLFKS 121
>Glyma15g16060.1
Length = 118
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 5 KAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDF 64
K +I DM+ MQ+ A+D+A A + ++V + ++A IKKEFD+ HGP W CIVG +F
Sbjct: 34 KVIIKSADMIPDMQKEAVDIAVAAFERYNVEK--DVAEQIKKEFDKRHGPTWHCIVGRNF 91
Query: 65 GSFVTHCCGCFIYFCIGSLAILLFRG 90
GS+VTH F+YF + A+LLF+
Sbjct: 92 GSYVTHETNHFVYFYLDQKAVLLFKS 117
>Glyma09g04830.1
Length = 122
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 5 KAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDF 64
K +I DM+ MQ+ A+D+A A + ++V + ++A IKKEFD+ HGP W CIVG +F
Sbjct: 38 KVIIKSADMIPDMQKEAVDIAVAAFEKYNVEK--DVAEQIKKEFDKRHGPTWHCIVGRNF 95
Query: 65 GSFVTHCCGCFIYFCIGSLAILLFRG 90
GS+VTH F+YF + A+LLF+
Sbjct: 96 GSYVTHETNHFVYFYLDQKAVLLFKS 121
>Glyma17g12490.1
Length = 176
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 11 TDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDFGSFVTH 70
+DM MQ +A A + D + A IA IKKEFD+ +GP W CIVG++FGSFVTH
Sbjct: 90 SDMPTFMQVHAFRCARRTYDSLEKFSAKLIAHNIKKEFDKAYGPVWHCIVGSNFGSFVTH 149
Query: 71 CCGCFIYFCIGSLAILLFRGSADQ 94
GCF+YF + +L ILLF+ +
Sbjct: 150 STGCFLYFSMENLYILLFKTKVKK 173
>Glyma12g34730.1
Length = 49
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/46 (91%), Positives = 45/46 (97%)
Query: 1 MLEGKAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKK 46
MLEGKAVIGETDMLQTMQQ+AL+LASKALDFFDVTEA +IARFIKK
Sbjct: 1 MLEGKAVIGETDMLQTMQQDALNLASKALDFFDVTEATDIARFIKK 46
>Glyma05g01580.1
Length = 246
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 12 DMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDFGSFVTHC 71
DM MQ +A+D A KA+D + + +A +KKEFD ++GP W CIVGT FGSFVTH
Sbjct: 161 DMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHS 220
Query: 72 CGCFIYFCI-GSLAILLFRGSADQEA 96
G F+YF + L ILLF+ + + A
Sbjct: 221 VGGFLYFSMDKKLYILLFKTAVHKAA 246
>Glyma17g10320.1
Length = 259
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 12 DMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDFGSFVTHC 71
DM MQ +A+D A KA+D + + +A +KKEFD ++GP W CIVGT FGSFVTH
Sbjct: 174 DMPPFMQIHAVDCARKAIDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHS 233
Query: 72 CGCFIYFCIG-SLAILLFRGSADQEA 96
G F+YF + L ILLF+ + + A
Sbjct: 234 VGGFLYFSMDQKLYILLFKTAVQKAA 259
>Glyma16g26790.1
Length = 130
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 12 DMLQTMQQNALDLASKALDFFDVTEAIEIARF---IKKEFDRMHGPGWQCIVGTDFGSFV 68
DM +Q AL A L+ ++ R +KKEFD +GP W CIVGT FGS+V
Sbjct: 42 DMPLPLQNRALQCARLHLESMPPGNKLDNKRLALALKKEFDSSYGPAWHCIVGTSFGSYV 101
Query: 69 THCCGCFIYFCIGSLAILLFRGSAD 93
TH G F+YF I + ILLF+ + +
Sbjct: 102 THSVGGFLYFSIDKVYILLFKTAVE 126
>Glyma12g35200.1
Length = 152
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 8 IGETDMLQTMQQNALDLASKALDFFDVTEAIE----IARFIKKEFDRMHGPGWQCIVGTD 63
+ +DM MQ++AL IAR +KKEFD +G W C++G
Sbjct: 55 LKSSDMPSHMQEHALRHTRSLFPLHHPPSPKPSNTLIARALKKEFDSKYGLAWHCVIGKS 114
Query: 64 FGSFVTHCCGCFIYFCIGSLAILLFR 89
FGSFV+H G FIYF I SL++LLF+
Sbjct: 115 FGSFVSHTGGGFIYFSIDSLSVLLFK 140
>Glyma02g07720.1
Length = 133
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 12 DMLQTMQQNALDLASKALDFFDVTEAIEIARF---IKKEFDRMHGPGWQCIVGTDFGSFV 68
DM +Q A A L+ ++ R +KKEFD +GP W CIVGT FGS+V
Sbjct: 45 DMPLPLQNRAFQCARLYLESMPPANKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYV 104
Query: 69 THCCGCFIYFCIGSLAILLFRGSAD 93
TH G F+YF I + ILLF+ + +
Sbjct: 105 THSVGGFLYFSIDKVYILLFKTAVE 129
>Glyma05g34910.1
Length = 133
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 12 DMLQTMQQNALDLASKALDFFDVT--EAIEIARFIKKEFDRMHGPGWQCIVGTDFGSFVT 69
DM +Q A A LD ++ +A +KKEFD +GP W CIVGT FGS+VT
Sbjct: 45 DMPLPLQSRAFRCARDLLDSMPPKKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVT 104
Query: 70 HCCGCFIYFCIGSLAILLFRGSAD 93
H G F+YF I + +LLF+ + +
Sbjct: 105 HSLGGFVYFSIDKVYVLLFKTAVE 128
>Glyma08g04800.1
Length = 133
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 12 DMLQTMQQNALDLASKALDFFDVT--EAIEIARFIKKEFDRMHGPGWQCIVGTDFGSFVT 69
DM +Q A A LD ++ +A +KKEFD +GP W CIVGT FGS+VT
Sbjct: 45 DMPLPLQNRAFRCARDLLDSMPSKKLDSKRLALTLKKEFDTSYGPAWHCIVGTSFGSYVT 104
Query: 70 HCCGCFIYFCIGSLAILLFRGSAD 93
H G F+YF I + +LLF+ + +
Sbjct: 105 HSFGGFVYFSIDKVYVLLFKTAVE 128
>Glyma13g35300.1
Length = 142
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 40 IARFIKKEFDRMHGPGWQCIVGTDFGSFVTHCCGCFIYFCIGSLAILLFR 89
IAR +KKEFD +G W C++G FGSFV+H G FIYF I SL++LLF+
Sbjct: 81 IARALKKEFDSKYGLAWHCVIGNSFGSFVSHTGGGFIYFSIDSLSVLLFK 130
>Glyma08g00340.1
Length = 60
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 46 KEFDRMHGPGWQCIVGTDFGSFVTHCCGCFIYFCIGSLAILLFRGSADQ 94
+EFD+ +GP W CIVG++FGSFVTH GCF+YF + +L ILLF+ +
Sbjct: 9 QEFDKAYGPVWHCIVGSNFGSFVTHSTGCFLYFSMENLYILLFKTKVKK 57
>Glyma09g04820.1
Length = 121
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 7 VIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDFGS 66
+I DM+ MQ+ A+D+A A + ++V + ++A IKKEFD+ HGP W CIVG +FG+
Sbjct: 36 IIKSADMIPDMQKEAVDIAVAAFEKYNVEK--DVAEQIKKEFDKRHGPTWHCIVGRNFGN 93
Query: 67 F 67
F
Sbjct: 94 F 94
>Glyma15g16060.2
Length = 107
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 5 KAVIGETDMLQTMQQNALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDF 64
K +I DM+ MQ+ A+D+A A + ++V + ++A IKKEFD+ HGP W CIVG +F
Sbjct: 34 KVIIKSADMIPDMQKEAVDIAVAAFERYNVEK--DVAEQIKKEFDKRHGPTWHCIVGRNF 91
Query: 65 GSFVTHCCGCFIYFC 79
H C + FC
Sbjct: 92 ----VHSCTS-LAFC 101