Miyakogusa Predicted Gene

Lj0g3v0152759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0152759.1 CUFF.9438.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g29110.1                                                        89   8e-19
Glyma02g35540.1                                                        85   2e-17
Glyma20g01300.1                                                        70   3e-13

>Glyma07g29110.1 
          Length = 678

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 71/119 (59%), Gaps = 11/119 (9%)

Query: 7   KPDGAVYNLLIFDHCRCLNVRKAYNMYMEMVHYGFVPHMFSVLALIKALHYYGRYNEMSW 66
           +P+ ++YNL+I  H R  NV KAYN+YME+ HYGF            +L      +E+S 
Sbjct: 571 RPNASIYNLMIHGHGRSGNVHKAYNLYMELEHYGFA-----------SLARERMNDELSQ 619

Query: 67  VIQNTLRSCNLNESELPKVLNEIDFPKCQINALLDVLAEIAMDGLLLDGGKCSYASART 125
           V+ N LRSC LN++++ KVL E++F +  +++ L VL ++  DGLL DGG  S     T
Sbjct: 620 VLLNILRSCKLNDAKVAKVLLEVNFKEGNMDSFLSVLTKMVKDGLLPDGGIHSSVPTST 678


>Glyma02g35540.1 
          Length = 277

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 72/107 (67%), Gaps = 12/107 (11%)

Query: 1   MLEGNYKPDGAVYNLLIFDHCRCLNVRKAYNMYMEMVHYGFVPHMFSVLALIKALHYYGR 60
           +++ N+KP+ ++YNL+I  H R  NV KAYN+YM            +V+AL+KAL   G 
Sbjct: 183 VVQRNHKPNASIYNLMIHGHSRRGNVHKAYNLYM------------AVIALVKALAREGM 230

Query: 61  YNEMSWVIQNTLRSCNLNESELPKVLNEIDFPKCQINALLDVLAEIA 107
            +E+S ++QN LRSC LN++++ KVL E++F +  ++ +L+VL ++A
Sbjct: 231 NDELSRLLQNILRSCKLNDAKVAKVLVEVNFKEGNMDVVLNVLTKMA 277


>Glyma20g01300.1 
          Length = 640

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 41/125 (32%)

Query: 1   MLEGNYKPDGAVYNLLIFDHCRCLNVRKAYNMYMEMVHYGFVPHMFSVLALIKALHYYGR 60
           ML+ N+KP+ A+YNL+I  H R  NV KAYN+                            
Sbjct: 557 MLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNL---------------------------- 588

Query: 61  YNEMSWVIQNTLRSCNLNESELPKVLNEIDFPKCQINALLDVLAEIAMDGLLLDGGKCSY 120
                        SC LN++++ KVL E++F +  ++A+L+VL E+A DGLL DGG  S 
Sbjct: 589 -------------SCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 635

Query: 121 ASART 125
           A A T
Sbjct: 636 APAST 640