Miyakogusa Predicted Gene

Lj0g3v0152709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0152709.1 Non Chatacterized Hit- tr|G7KNM5|G7KNM5_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,60.27,0.00000000000002,seg,NULL,CUFF.9426.1
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g22270.1                                                        65   1e-11
Glyma05g14870.1                                                        64   3e-11
Glyma19g25330.1                                                        52   2e-07
Glyma16g06310.1                                                        51   3e-07

>Glyma19g22270.1 
          Length = 224

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)

Query: 1  MGSCYSVQRKSDSDMRLKLAFWSKTDKLVIPPSPIKEQPKNGYFN-WSSTRSTTNFTDYG 59
          MG C SV R ++ DM+LKL+F SK++KLVIPP+ IK Q +    N WS+ RSTT FTD+G
Sbjct: 1  MGLCSSVPRNANEDMKLKLSFGSKSEKLVIPPTSIKGQQQQQPQNGWSTARSTTTFTDHG 60


>Glyma05g14870.1 
          Length = 214

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 8/60 (13%)

Query: 1  MGSCYSVQRKSDSDMRLKLAFWSKTDKLVIPPSPIK-EQPKNGYFNWSSTRSTTNFTDYG 59
          MG C SV R +++DM+LKL+F SK++KLVI PSPIK +QP+NG+       STT FTD+G
Sbjct: 1  MGLCSSVPRNANADMKLKLSFGSKSEKLVIHPSPIKGQQPQNGW-------STTTFTDHG 53


>Glyma19g25330.1 
          Length = 245

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 17/76 (22%)

Query: 1  MGSCYSVQRKSDSDMR-LKLAFWSKTDKLVIPPSPIKEQPK--NGYF------------N 45
          MG C SV R   ++M+ L L+F SKT+ LVIPPSP K++ K  NG F             
Sbjct: 1  MGLCSSVHRNEQTNMKHLTLSFESKTESLVIPPSPFKDKDKAINGNFVVADDDAAFKAQQ 60

Query: 46 WSSTRSTTNF--TDYG 59
          WS +RSTT F  TD G
Sbjct: 61 WSPSRSTTTFSVTDCG 76


>Glyma16g06310.1 
          Length = 249

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 16/72 (22%)

Query: 1  MGSCYSVQRKSDSDMR--LKLAFWSKTDKLVIPPSPI--KEQPKNGYF------------ 44
          MG C SV R   ++M+  L L+F SKT+ L+IP SP   KE+PKNG F            
Sbjct: 1  MGLCSSVHRNEQTNMKHHLTLSFESKTESLLIPSSPFEDKEKPKNGNFVVVADDDAFKPQ 60

Query: 45 NWSSTRSTTNFT 56
           WS +RSTT F+
Sbjct: 61 QWSPSRSTTTFS 72