Miyakogusa Predicted Gene

Lj0g3v0151899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151899.1 Non Chatacterized Hit- tr|I1KMJ2|I1KMJ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2557
PE=,49.43,0.0000000001, ,CUFF.9357.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g36010.1                                                        70   4e-13
Glyma14g03990.1                                                        57   5e-09
Glyma06g10350.1                                                        50   8e-07
Glyma04g10480.1                                                        49   1e-06

>Glyma07g36010.1 
          Length = 388

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 12/87 (13%)

Query: 17  RSSTSGASIQRPSSERSVEGEEEDNARPR-LGELETGNGRESLNQ------TAAVTVVMG 69
           R +   A+I   S E+ V        RPR +G     +GRES N+       AAVTVVMG
Sbjct: 19  RCAPRTAAIGARSGEKKVVA-----PRPRSVGRFAAESGRESGNRLAEVMLAAAVTVVMG 73

Query: 70  VGNRVMYKLALVPLKQYPFFLAQTGTL 96
            GNRV+YKLALVPL+ YPFFLAQ  T 
Sbjct: 74  AGNRVLYKLALVPLRNYPFFLAQLATF 100


>Glyma14g03990.1 
          Length = 401

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/44 (61%), Positives = 30/44 (68%), Gaps = 10/44 (22%)

Query: 68  MGVGNRVMYKLALVPLKQYPFFLAQTGT----------LYLGHH 101
           +GVGNRV+YKLALVPLK YPFFLAQ  T          LY+ HH
Sbjct: 69  LGVGNRVLYKLALVPLKHYPFFLAQLATFGYVIVYFAILYIRHH 112


>Glyma06g10350.1 
          Length = 408

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/32 (62%), Positives = 26/32 (81%)

Query: 61  TAAVTVVMGVGNRVMYKLALVPLKQYPFFLAQ 92
           ++ + V   V NRV+YKLALVP+K+YPFFLAQ
Sbjct: 75  SSTIVVTTAVANRVLYKLALVPMKEYPFFLAQ 106


>Glyma04g10480.1 
          Length = 214

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 64  VTVVMGVGNRVMYKLALVPLKQYPFFLAQTGTL 96
           + V   V NRV+YKLALVP+K+YPFFLAQ  T 
Sbjct: 76  IVVTTAVANRVLYKLALVPMKEYPFFLAQFITF 108