Miyakogusa Predicted Gene

Lj0g3v0151829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151829.1 tr|I1CPV8|I1CPV8_RHIO9 SSU rRNA processing
protein OS=Rhizopus delemar (strain RA 99-880 / ATCC
MYA-,41.73,3e-18,RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED,Ribosomal
RNA-processing protein 7; coiled-coil,NULL; seg,CUFF.9359.1
         (291 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g32580.2                                                       326   2e-89
Glyma07g32580.1                                                       323   2e-88
Glyma13g24010.1                                                       179   3e-45
Glyma19g25140.1                                                       132   4e-31

>Glyma07g32580.2 
          Length = 290

 Score =  326 bits (835), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 175/292 (59%), Positives = 208/292 (71%), Gaps = 3/292 (1%)

Query: 1   MMKMNKVKRDAXXXXXXXXXXXXXQNADVELETHVTLNTQEDRGMRDRKANKDKASTNRK 60
           M  M K KR +             QN DVE+    T N     GM  R+A K+K S N+K
Sbjct: 1   MKVMKKGKRPSHSGEKKKNKRNREQNPDVEIIV-ATQNVDSANGMHVREAKKEKTSINKK 59

Query: 61  RKNKEKSRVERQMPVGEEVDLVEKNDGILDNCHSKYEEIKDSMEHGDSDIGASVEPCRSX 120
           RK+K+K+ V ++ P G+EVDL E++DG++DN HSK EEI+    H DSD GA+++PCRS 
Sbjct: 60  RKSKDKNLVRKRKPKGQEVDLDEQSDGVVDNPHSKAEEIQGLDGHIDSDSGAAIKPCRSK 119

Query: 121 XXXXXXXXEVQNSPEK-VEGHHQDEVHIISSGDEDCSKGMKKWIMEYHQSRPGLETLQRQ 179
                   EVQ+SPEK  EG +Q+EV+IISS D+DCSKGMKKWIMEYHQSRPGL+ LQ Q
Sbjct: 120 KDKKKRK-EVQDSPEKEGEGCNQEEVYIISSVDDDCSKGMKKWIMEYHQSRPGLDVLQNQ 178

Query: 180 IDDFITAHXXXXXXXXXXXXXXXXDGGWTVVVHHKGRKKTTESESGIAVGSVAQAAVENK 239
           IDDFITA                 +GGWTVVVHHKGRKKTT+SESGIAVGSVAQAAVENK
Sbjct: 179 IDDFITAQEVKLEEERKEKEALAAEGGWTVVVHHKGRKKTTDSESGIAVGSVAQAAVENK 238

Query: 240 MSKKKPKEVGLDFYRFQKKEAHRNELMELQSKFEEDKKHLQQLRASRKFRPY 291
           M+KKK KEVG DFYRFQ++EA RNE+M LQSKFEEDKK LQQ+RA+RKFRPY
Sbjct: 239 MTKKKHKEVGQDFYRFQRREAQRNEIMTLQSKFEEDKKRLQQMRAARKFRPY 290


>Glyma07g32580.1 
          Length = 292

 Score =  323 bits (827), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 174/293 (59%), Positives = 207/293 (70%), Gaps = 3/293 (1%)

Query: 1   MMKMNKVKRDAXXXXXXXXXXXXXQNADVELETHV-TLNTQEDRGMRDRKANKDKASTNR 59
           M  M K KR +             QN DVE+       N     GM  R+A K+K S N+
Sbjct: 1   MKVMKKGKRPSHSGEKKKNKRNREQNPDVEIIVATQNGNVDSANGMHVREAKKEKTSINK 60

Query: 60  KRKNKEKSRVERQMPVGEEVDLVEKNDGILDNCHSKYEEIKDSMEHGDSDIGASVEPCRS 119
           KRK+K+K+ V ++ P G+EVDL E++DG++DN HSK EEI+    H DSD GA+++PCRS
Sbjct: 61  KRKSKDKNLVRKRKPKGQEVDLDEQSDGVVDNPHSKAEEIQGLDGHIDSDSGAAIKPCRS 120

Query: 120 XXXXXXXXXEVQNSPEK-VEGHHQDEVHIISSGDEDCSKGMKKWIMEYHQSRPGLETLQR 178
                    EVQ+SPEK  EG +Q+EV+IISS D+DCSKGMKKWIMEYHQSRPGL+ LQ 
Sbjct: 121 KKDKKKRK-EVQDSPEKEGEGCNQEEVYIISSVDDDCSKGMKKWIMEYHQSRPGLDVLQN 179

Query: 179 QIDDFITAHXXXXXXXXXXXXXXXXDGGWTVVVHHKGRKKTTESESGIAVGSVAQAAVEN 238
           QIDDFITA                 +GGWTVVVHHKGRKKTT+SESGIAVGSVAQAAVEN
Sbjct: 180 QIDDFITAQEVKLEEERKEKEALAAEGGWTVVVHHKGRKKTTDSESGIAVGSVAQAAVEN 239

Query: 239 KMSKKKPKEVGLDFYRFQKKEAHRNELMELQSKFEEDKKHLQQLRASRKFRPY 291
           KM+KKK KEVG DFYRFQ++EA RNE+M LQSKFEEDKK LQQ+RA+RKFRPY
Sbjct: 240 KMTKKKHKEVGQDFYRFQRREAQRNEIMTLQSKFEEDKKRLQQMRAARKFRPY 292


>Glyma13g24010.1 
          Length = 132

 Score =  179 bits (454), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 88/118 (74%), Positives = 96/118 (81%)

Query: 174 ETLQRQIDDFITAHXXXXXXXXXXXXXXXXDGGWTVVVHHKGRKKTTESESGIAVGSVAQ 233
           + LQ QIDDFITAH                +GGWTVVVHHKGRKKTT+SESGIAVGSVAQ
Sbjct: 15  DVLQNQIDDFITAHEAKLEEEREEKEALAAEGGWTVVVHHKGRKKTTDSESGIAVGSVAQ 74

Query: 234 AAVENKMSKKKPKEVGLDFYRFQKKEAHRNELMELQSKFEEDKKHLQQLRASRKFRPY 291
           AAVENKM+KKK KEVGLDFYRFQ+KEA RNE+M LQSKFEEDKK LQQ+RA+RKFRPY
Sbjct: 75  AAVENKMTKKKHKEVGLDFYRFQRKEAQRNEIMTLQSKFEEDKKRLQQMRAARKFRPY 132


>Glyma19g25140.1 
          Length = 142

 Score =  132 bits (332), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/86 (77%), Positives = 73/86 (84%), Gaps = 1/86 (1%)

Query: 206 GWTVVVHHKGRKKTTESESGIAVGSVAQAAVENKMSKKKPKEVGLDFYRFQKKEAHRNEL 265
           GWTVV+HHKGRKKT +SESGIAV SVAQA VENKM+KKK K VGLDFY  Q KE  RNE+
Sbjct: 58  GWTVVLHHKGRKKTRDSESGIAVVSVAQAPVENKMAKKKHKGVGLDFY-VQIKEVQRNEI 116

Query: 266 MELQSKFEEDKKHLQQLRASRKFRPY 291
           M LQ KFEEDK+ LQQLRA+RKFRPY
Sbjct: 117 MTLQCKFEEDKRRLQQLRAARKFRPY 142