Miyakogusa Predicted Gene

Lj0g3v0151579.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151579.1 Non Chatacterized Hit- tr|C5YB39|C5YB39_SORBI
Putative uncharacterized protein Sb06g034000
OS=Sorghu,40,3e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; VPRBP
PROTEIN-RELATED,NULL,CUFF.9326.1
         (158 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g07880.1                                                       211   2e-55
Glyma04g07810.1                                                       210   5e-55

>Glyma06g07880.1 
          Length = 1814

 Score =  211 bits (538), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 97/120 (80%), Positives = 108/120 (90%)

Query: 34  VNKLMAKITSNPDNPKPSVLHALASILETHESRYMEESGHSSSSNARAAHLIGRLGSVIR 93
           VNKLM KITS PDNP  +VLHALASILE  ESRYMEE+GHSSSS ARAAH+IGRLG +IR
Sbjct: 30  VNKLMEKITSAPDNPNATVLHALASILEAQESRYMEENGHSSSSTARAAHIIGRLGGLIR 89

Query: 94  ENDDFFELISAKFLLETRYSTAVQAAAARLILCCSLTWIYPHVFEESAVENITNWVKDDN 153
           END+FFELIS+KFLLETRYST++QAA+ RL+LCCSLTWIYPHVFEES +ENI NWV DDN
Sbjct: 90  ENDEFFELISSKFLLETRYSTSIQAASGRLLLCCSLTWIYPHVFEESVMENIKNWVMDDN 149


>Glyma04g07810.1 
          Length = 1815

 Score =  210 bits (534), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 97/120 (80%), Positives = 107/120 (89%)

Query: 34  VNKLMAKITSNPDNPKPSVLHALASILETHESRYMEESGHSSSSNARAAHLIGRLGSVIR 93
           VNKLM KITS PDNP  +VLHALASILE  ESRYMEE+GHSSS  ARAAH+IGRLG +IR
Sbjct: 19  VNKLMEKITSAPDNPNATVLHALASILEAQESRYMEENGHSSSITARAAHIIGRLGGLIR 78

Query: 94  ENDDFFELISAKFLLETRYSTAVQAAAARLILCCSLTWIYPHVFEESAVENITNWVKDDN 153
           END+FFELIS+KFLLETRYST++QAAA RL+LCCSLTWIYPHVFEES +ENI NWV DDN
Sbjct: 79  ENDEFFELISSKFLLETRYSTSIQAAAGRLLLCCSLTWIYPHVFEESVMENIKNWVMDDN 138