Miyakogusa Predicted Gene

Lj0g3v0150869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150869.1 Non Chatacterized Hit- tr|I1JCQ0|I1JCQ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13721
PE,82.61,0,FAD/NAD(P)-binding domain,NULL; Thi4,NULL; no
description,NULL; PHYTOENE DEHYDROGENASE,NULL,CUFF.9266.1
         (217 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g06340.1                                                       385   e-107
Glyma16g25390.1                                                       372   e-103

>Glyma02g06340.1 
          Length = 561

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/230 (82%), Positives = 206/230 (89%), Gaps = 14/230 (6%)

Query: 1   MWRRTFTSATA-LKDKKWDALIIGGGHNGLTAAAYLARGGLSVA------------VTEE 47
           MWRR+F+S+TA LK KKWDAL+IGGGHNGLTAAAYLARGGLSVA            VTEE
Sbjct: 1   MWRRSFSSSTAALKGKKWDALVIGGGHNGLTAAAYLARGGLSVAILERRHVIGGAAVTEE 60

Query: 48  LVPGFKFSRCSYLQSLLRPSVMNELELGSKHGLKLLRSNPLSFTPCLDGRYLLLGTDKHL 107
           LVPGFKFSRCSYLQSLLRPSV+ ELELG KHGLKLL+SNP SFTPCLDGRYLLLG DK L
Sbjct: 61  LVPGFKFSRCSYLQSLLRPSVIKELELG-KHGLKLLKSNPSSFTPCLDGRYLLLGPDKDL 119

Query: 108 NHSEISKFSQKDAEAYPRYESKLESFCKFMDLVLDSPPPESLQHKSSLNEQLKNKIQNSV 167
           NHSEISKFS KDA+AYPRY+++LESFCKFMDLVLDSPPPES+ HKSS+NE+LKNK+QNSV
Sbjct: 120 NHSEISKFSLKDAQAYPRYQTQLESFCKFMDLVLDSPPPESVHHKSSINEKLKNKLQNSV 179

Query: 168 FWARCLRQASSLGQKDMVDFLDLLLSPVSKVLNNWFEADVLKATLASDAV 217
           FWA CLRQ SSLGQKDMVDF+DLLLSP SKVLNNWFEADVLKATLA+DAV
Sbjct: 180 FWASCLRQVSSLGQKDMVDFMDLLLSPASKVLNNWFEADVLKATLATDAV 229


>Glyma16g25390.1 
          Length = 565

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/234 (81%), Positives = 203/234 (86%), Gaps = 18/234 (7%)

Query: 1   MWRRTFTSATA-----LKDKKWDALIIGGGHNGLTAAAYLARGGLSVAV----------- 44
           MWRR+F+S+TA     LK KKWDALIIGGGHNGLTAAAYLARGGLSVAV           
Sbjct: 1   MWRRSFSSSTAATTATLKGKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAA 60

Query: 45  -TEELVPGFKFSRCSYLQSLLRPSVMNELELGSKHGLKLLRSNPLSFTPCLDGRYLLLGT 103
            TEELVPGFKFSRCSYLQSLLRPSV+ ELELG KHGLKLL+ NP SFTPCLDGRYLLLG 
Sbjct: 61  VTEELVPGFKFSRCSYLQSLLRPSVIKELELG-KHGLKLLKRNPSSFTPCLDGRYLLLGP 119

Query: 104 DKHLNHSEISKFSQKDAEAYPRYESKLESFCKFMDLVLDSPPPESLQHKSSLNEQLKNKI 163
           DK LNHSEISKFS  DA+AYPRYES+LESFCKFMDLVLDSPPPES+ HKSS+NE+LKNKI
Sbjct: 120 DKDLNHSEISKFSLADAQAYPRYESQLESFCKFMDLVLDSPPPESVHHKSSINEKLKNKI 179

Query: 164 QNSVFWARCLRQASSLGQKDMVDFLDLLLSPVSKVLNNWFEADVLKATLASDAV 217
           QNSVFWA CLRQ SSLGQKDMV+F+DLLLSP SKVLNNWFE DVLKATLA+DAV
Sbjct: 180 QNSVFWASCLRQVSSLGQKDMVNFMDLLLSPASKVLNNWFETDVLKATLATDAV 233