Miyakogusa Predicted Gene

Lj0g3v0149189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0149189.1 Non Chatacterized Hit- tr|D6WB97|D6WB97_TRICA
Putative uncharacterized protein OS=Tribolium castaneu,46.73,3e-19,no
description,Peptidyl-tRNA hydrolase II domain; PTH2,Peptidyl-tRNA
hydrolase, PTH2; UNKNOWN PROTEI,CUFF.9140.1
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g08080.1                                                       264   3e-71
Glyma04g08040.1                                                       251   3e-67

>Glyma06g08080.1 
          Length = 167

 Score =  264 bits (675), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 133/184 (72%), Positives = 149/184 (80%), Gaps = 18/184 (9%)

Query: 4   MACTFPSIRFFTPSSSYLSSRVRVTLAHFHAASVSYRASGLTSSSMSQPADSDTLSTPIE 63
           MAC  P +R     S++ S+ +R TL H HA S+S R S L+S+SMSQPA ++       
Sbjct: 1   MACGIP-LRL----SAFPSTTIRATLPHLHAPSISSRPSPLSSNSMSQPATTN------- 48

Query: 64  APSKPENADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSSKDDPLTVDYCSPDKI 123
                 +ADV+VQYVVLRRDLIDTWPLGSVVTQGCHASVSA+W +KDDP TVDYCSPDKI
Sbjct: 49  ------HADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWFNKDDPFTVDYCSPDKI 102

Query: 124 DSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWIEQPENFPTCLATKPYPKSVVSPYFKK 183
           DSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLWIEQPEN PTCLATKPYPKS+VS YFKK
Sbjct: 103 DSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSIVSSYFKK 162

Query: 184 LKLC 187
           LKLC
Sbjct: 163 LKLC 166


>Glyma04g08040.1 
          Length = 143

 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 117/135 (86%), Positives = 127/135 (94%)

Query: 53  ADSDTLSTPIEAPSKPENADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSSKDDP 112
           AD + ++T  +APS+PENADV+VQYVVLRRDLIDTWPLGSVVTQGCHASVSA+WS+K+DP
Sbjct: 8   ADPNAIATTNDAPSQPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKEDP 67

Query: 113 LTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWIEQPENFPTCLATKPY 172
            TVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLWIEQPEN PTCLATKPY
Sbjct: 68  FTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPY 127

Query: 173 PKSVVSPYFKKLKLC 187
           PKS VS YFKKLKLC
Sbjct: 128 PKSSVSSYFKKLKLC 142