Miyakogusa Predicted Gene

Lj0g3v0148479.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0148479.1 Non Chatacterized Hit- tr|B9S9U5|B9S9U5_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,40.49,9e-19,seg,NULL,CUFF.9084.1
         (244 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g08720.1                                                       130   2e-30
Glyma02g46910.1                                                       100   1e-21
Glyma14g01800.1                                                        84   2e-16
Glyma08g44070.1                                                        82   5e-16

>Glyma18g08720.1 
          Length = 259

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/151 (46%), Positives = 89/151 (58%), Gaps = 11/151 (7%)

Query: 1   MDQVKSH----MVQSIKAHNFLIKLTXXXXXXXXXXXXXXXXXXMCFLHQFSFYFSSFPL 56
           MDQ+KSH    ++QS K+HN++IKL                   + FL+ F+ YFS+F L
Sbjct: 1   MDQIKSHKIEALIQSTKSHNYIIKLIQLLVPLSVFSFFISPSSLLAFLYHFNLYFSTFSL 60

Query: 57  QLFTHTIDKNCMFLLCNGLLVFVGITRX--XXXXXXXXXXXKYFEGGLQTPYSDVETNQP 114
           QLFTHTIDKNCMFLLCNGLLVFVGITR              KY E G Q+PYSDVE N+ 
Sbjct: 61  QLFTHTIDKNCMFLLCNGLLVFVGITRSLSGSSSVAESESSKYVEDGSQSPYSDVEANEA 120

Query: 115 MLLEKTNDQDQ-----QQNTEGEHAVEIRYC 140
           ++L +    ++      Q T  EHA+EI+Y 
Sbjct: 121 IILVEKEAMEKIHEPHGQKTGTEHAIEIKYS 151



 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/33 (87%), Positives = 31/33 (93%)

Query: 212 ALSTEELNKKFDDFIRRMKEDLRIEAQRHLVMV 244
            LSTEELNKKFDDFIR+MKEDLRIEAQR L+MV
Sbjct: 227 VLSTEELNKKFDDFIRKMKEDLRIEAQRQLLMV 259


>Glyma02g46910.1 
          Length = 257

 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 80/145 (55%), Gaps = 9/145 (6%)

Query: 4   VKSHMVQSIKAHNFLIKLTXXXXXXXXXXXXXXXXXXMCFLHQFSFYFSSFPLQLFTHTI 63
           + ++M  ++KAH +L+KLT                  + FLH F FYFS+FP QL+TH I
Sbjct: 10  IATNMTHNLKAHYYLVKLTQLLVSVSVCSFIFSPSSLLVFLHYFKFYFSTFPFQLYTHNI 69

Query: 64  DKNCMFLLCNGLLVFVGITRXXXXXX--XXXXXXKYF-EGGLQTPYSDVETNQPML---- 116
           DKN MFLLCNG+LVFVGIT+               Y  + G Q+ +S +E N+ ML    
Sbjct: 70  DKNSMFLLCNGILVFVGITKSLSGSSCCDDNKPSTYVKDDGSQSRFSVIEANELMLEIVE 129

Query: 117 -LEKTNDQDQQQNTEGEHAVEIRYC 140
             E+T+D D +QNT  E  +EI  C
Sbjct: 130 TEEQTSDPD-EQNTVVEQVIEIENC 153



 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 31/32 (96%)

Query: 213 LSTEELNKKFDDFIRRMKEDLRIEAQRHLVMV 244
           LSTEELNKKF+DFIR+MKEDLRIEAQR LVMV
Sbjct: 226 LSTEELNKKFEDFIRKMKEDLRIEAQRQLVMV 257


>Glyma14g01800.1 
          Length = 261

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 9/143 (6%)

Query: 6   SHMVQSIKAHNFLIKLTXXXXXXXXXXXXXXXXXXMCFLHQFSFYFSSFPLQLFTHTIDK 65
           + M  ++K   +L+KLT                  + FL+ F FY S+FP QL+TH IDK
Sbjct: 11  ATMTHNLKPLYYLVKLTQLFVSVSVCSFIFSPSSLLVFLYYFKFYLSAFPFQLYTHNIDK 70

Query: 66  NCMFLLCNGLLVFVGITRXXXXXX--XXXXXXKYF-EGGLQTPYSDVETNQPM-----LL 117
           N MFLLCNG+LVFVGIT+               Y  + G Q+ +  +E N+ M       
Sbjct: 71  NSMFLLCNGILVFVGITKSLSRSSCCDDYRPSAYIKDDGSQSRFWVIEANELMSEIVETE 130

Query: 118 EKTNDQDQQQNTEGEHAVEIRYC 140
           E+T++ D +QNT  E  +EI  C
Sbjct: 131 EQTSEPD-EQNTAVEQVIEIENC 152



 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 31/32 (96%)

Query: 213 LSTEELNKKFDDFIRRMKEDLRIEAQRHLVMV 244
           LSTEELNKKF+DFIR+MKEDLRIEAQR LVMV
Sbjct: 230 LSTEELNKKFEDFIRKMKEDLRIEAQRQLVMV 261


>Glyma08g44070.1 
          Length = 178

 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 43/63 (68%), Gaps = 3/63 (4%)

Query: 58  LFTHTIDKNCMFLLCNGLLVFVGITRX---XXXXXXXXXXXKYFEGGLQTPYSDVETNQP 114
           LFTHTIDKNCMFLLCNGLLVFVGITR               KY E G Q+PYSDVE N+ 
Sbjct: 1   LFTHTIDKNCMFLLCNGLLVFVGITRSLSGSSGVAESESSSKYVEDGSQSPYSDVEANEA 60

Query: 115 MLL 117
           ++L
Sbjct: 61  IIL 63



 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 31/32 (96%)

Query: 213 LSTEELNKKFDDFIRRMKEDLRIEAQRHLVMV 244
           LSTEELN+KFDDFIR+MKEDLRIEAQR L+MV
Sbjct: 145 LSTEELNRKFDDFIRKMKEDLRIEAQRQLLMV 176