Miyakogusa Predicted Gene

Lj0g3v0148359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0148359.1 Non Chatacterized Hit- tr|B9RWA4|B9RWA4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.18,3e-18,coiled-coil,NULL; seg,NULL,CUFF.9073.1
         (211 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g33310.1                                                       163   1e-40

>Glyma16g33310.1 
          Length = 311

 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/217 (50%), Positives = 133/217 (61%), Gaps = 24/217 (11%)

Query: 1   MKKYVNTLRVVTHLIDGVNVNNKHDAMKTTRALVLLESCNDIEKKCK---KSGLCLRRLM 57
           MKKYV +LR+V H               T+RAL  LESC+ IEK+ K   K G CLR+ +
Sbjct: 113 MKKYVESLRIVAHSCTNAT---------TSRALDKLESCHGIEKRLKTMGKRGSCLRKTL 163

Query: 58  LRQKLFHDDHETEFSEIVTGSKAMALMGCRFLEQGLSFDC-KSGLPLIKKCPPMF-SFLL 115
           LRQKL     ++EFSEIV GSK MAL+ C  LE  LSFDC + G P++K C PM  S+L 
Sbjct: 164 LRQKL---GQKSEFSEIVCGSKVMALISCFSLEHALSFDCSRGGFPMMK-CHPMNCSWLR 219

Query: 116 GLAEKAEGSAVKKLHKRGSRCFVMSELQQTVAAARELXXXXXXXXXXXXIKSS-VEGLKR 174
            + +  EGS  KK  +R      M ELQQTV AAREL            ++ S VE +KR
Sbjct: 220 IMQDLVEGSGEKKKSRRS-----MIELQQTVDAARELKEQIKGKREKQMVEYSCVERVKR 274

Query: 175 SCRGLEDELDFLEGRVKDLYKGLIDVRMALLGILSQA 211
           SC  LE  L F+EG+V+DLYK LIDVRMALLGILSQA
Sbjct: 275 SCGDLEGGLGFIEGKVRDLYKSLIDVRMALLGILSQA 311