Miyakogusa Predicted Gene

Lj0g3v0147879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147879.1 Non Chatacterized Hit- tr|J3MB50|J3MB50_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB06G1,56.04,2e-19,Ran
BP2/NZF zinc finger-like,NULL; ZF_RANBP2_1,Zinc finger, RanBP2-type;
seg,NULL; ZF_RANBP2_2,Zinc ,GO025651.path2.1
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g22470.1                                                       126   5e-30
Glyma07g03620.1                                                       125   7e-30
Glyma04g07270.1                                                       102   9e-23
Glyma04g07270.3                                                       102   1e-22
Glyma04g07270.2                                                       102   1e-22
Glyma06g07350.2                                                       101   2e-22
Glyma06g07350.1                                                       101   2e-22
Glyma06g24770.1                                                        77   3e-15
Glyma17g12570.1                                                        70   4e-13
Glyma05g08440.1                                                        69   8e-13
Glyma17g12580.1                                                        67   3e-12
Glyma05g08430.1                                                        67   5e-12
Glyma02g35480.1                                                        64   4e-11

>Glyma08g22470.1 
          Length = 146

 Score =  126 bits (317), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/93 (72%), Positives = 67/93 (72%), Gaps = 1/93 (1%)

Query: 1  MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPG 60
          MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKY                         VRPG
Sbjct: 1  MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVVDFGGFGGRGGSSFGLTGSD-VRPG 59

Query: 61 DWYCAAANCGAHNFASRSSCFKCGAFKDDLVGG 93
          DWYCAAANCGAHNFASRSSCFKCGAFKDDL GG
Sbjct: 60 DWYCAAANCGAHNFASRSSCFKCGAFKDDLAGG 92



 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 3   RPGDWNCRS--CQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPG 60
           RPGDW C +  C   NF  R SC +CG  K                           + G
Sbjct: 57  RPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGGGYNSSDILRSRAFGGSGRPGWKSG 116

Query: 61  DWYCAAANCGAHNFASRSSCFKCGAFKD 88
           DW C+ + C  HNFASR  CFKC A +D
Sbjct: 117 DWICSRSGCNEHNFASRMECFKCSAPRD 144


>Glyma07g03620.1 
          Length = 144

 Score =  125 bits (315), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 69/96 (71%), Gaps = 2/96 (2%)

Query: 1  MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPG 60
          MSRPGDWNCRSCQHLNFQRRDSCQRCGD+KY                         VRPG
Sbjct: 1  MSRPGDWNCRSCQHLNFQRRDSCQRCGDAKYGDRVDFGGFGGRGGSSFGLTGSD--VRPG 58

Query: 61 DWYCAAANCGAHNFASRSSCFKCGAFKDDLVGGFSS 96
          DWYCAAANCGAHNFASRSSCFKCGAFKDDL G ++S
Sbjct: 59 DWYCAAANCGAHNFASRSSCFKCGAFKDDLAGSYNS 94



 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 3   RPGDWNCRS--CQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPG 60
           RPGDW C +  C   NF  R SC +CG  K                           + G
Sbjct: 56  RPGDWYCAAANCGAHNFASRSSCFKCGAFK-DDLAGSYNSSDILRSRAFGGSGRPGWKSG 114

Query: 61  DWYCAAANCGAHNFASRSSCFKCGAFKD 88
           DW C  + C  HNFASR  CFKC A +D
Sbjct: 115 DWICTRSGCNEHNFASRMECFKCSAPRD 142


>Glyma04g07270.1 
          Length = 171

 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/94 (56%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXX-VRP 59
           MSRPGDWNCR+C HLNFQRR+SCQRCG+ +                           VRP
Sbjct: 13  MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRP 72

Query: 60  GDWYCAAANCGAHNFASRSSCFKCGAFKDDLVGG 93
           GDWYC   NCGAHNFASRSSCFKCGA K+D   G
Sbjct: 73  GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAG 106


>Glyma04g07270.3 
          Length = 159

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/94 (56%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 1  MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXX-VRP 59
          MSRPGDWNCR+C HLNFQRR+SCQRCG+ +                           VRP
Sbjct: 1  MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRP 60

Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDDLVGG 93
          GDWYC   NCGAHNFASRSSCFKCGA K+D   G
Sbjct: 61 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAG 94


>Glyma04g07270.2 
          Length = 159

 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/94 (56%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 1  MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXX-VRP 59
          MSRPGDWNCR+C HLNFQRR+SCQRCG+ +                           VRP
Sbjct: 1  MSRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGGDYGGGFGGGRGSSSFGFTTGPDVRP 60

Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDDLVGG 93
          GDWYC   NCGAHNFASRSSCFKCGA K+D   G
Sbjct: 61 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAG 94


>Glyma06g07350.2 
          Length = 163

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 1  MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXX-XXVRP 59
          M+RPGDWNCR+C HLNFQRR+SCQRCG+ +                           VRP
Sbjct: 1  MNRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGDYGGGFGGGRGSSSFGGFTTGPDVRP 60

Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDDLVGG 93
          GDWYC   NCGAHNFASRSSCFKCGA K+D   G
Sbjct: 61 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAG 94


>Glyma06g07350.1 
          Length = 163

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 1  MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXX-XXVRP 59
          M+RPGDWNCR+C HLNFQRR+SCQRCG+ +                           VRP
Sbjct: 1  MNRPGDWNCRTCNHLNFQRRESCQRCGEPRSGGGDYGGGFGGGRGSSSFGGFTTGPDVRP 60

Query: 60 GDWYCAAANCGAHNFASRSSCFKCGAFKDDLVGG 93
          GDWYC   NCGAHNFASRSSCFKCGA K+D   G
Sbjct: 61 GDWYCTVGNCGAHNFASRSSCFKCGAPKEDSSAG 94


>Glyma06g24770.1 
          Length = 140

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 11/84 (13%)

Query: 5  GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
          GDW C +CQH+NF++RD+CQ C   K+                            GDWYC
Sbjct: 6  GDWMCGACQHINFKKRDACQSCAYPKFGGPDPTTYRYNSTE-----------TLAGDWYC 54

Query: 65 AAANCGAHNFASRSSCFKCGAFKD 88
           A NCGAHNFASRSSCF+CGA KD
Sbjct: 55 TAMNCGAHNFASRSSCFRCGALKD 78


>Glyma17g12570.1 
          Length = 209

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 14/85 (16%)

Query: 5  GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
          GDW C  C+H+NF++R++CQ CG  KY                            GDW+C
Sbjct: 6  GDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALA-----------GDWFC 54

Query: 65 AAANCGAHNFASRSSCFKCGAFKDD 89
             NCGAHNFASRS+CF+CG+ KDD
Sbjct: 55 ---NCGAHNFASRSNCFRCGSMKDD 76


>Glyma05g08440.1 
          Length = 133

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 14/85 (16%)

Query: 5  GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
          GDW C  C+H+NF++R++CQ CG  KY                           PGDW+C
Sbjct: 6  GDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTE-----------ALPGDWFC 54

Query: 65 AAANCGAHNFASRSSCFKCGAFKDD 89
             NCGAHN+A+RSSC++CG+ KDD
Sbjct: 55 ---NCGAHNYANRSSCYRCGSMKDD 76


>Glyma17g12580.1 
          Length = 127

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 14/89 (15%)

Query: 5  GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
          GDW C  C+H+NF++R++CQ CG  KY                            GDW+C
Sbjct: 6  GDWMCGVCEHINFKKREACQSCGYPKYGGHDPSTYRYNKTE-----------ALAGDWFC 54

Query: 65 AAANCGAHNFASRSSCFKCGAFKDDLVGG 93
             NCGAHN+ASRSSC++CGA KD    G
Sbjct: 55 ---NCGAHNYASRSSCYRCGAIKDYYSSG 80


>Glyma05g08430.1 
          Length = 133

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 14/92 (15%)

Query: 5  GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
          GDW C  C+H+NF++R++CQ C   KY                            GDW+C
Sbjct: 6  GDWMCGVCEHINFKKRETCQSCRYPKYGGTDPSTYRYNKTE-----------ALAGDWFC 54

Query: 65 AAANCGAHNFASRSSCFKCGAFKDDLVGGFSS 96
             NCGAHN+ASRSSC++CGA KD    G+ +
Sbjct: 55 ---NCGAHNYASRSSCYRCGAIKDYYCSGYGT 83


>Glyma02g35480.1 
          Length = 111

 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 14/84 (16%)

Query: 5  GDWNCRSCQHLNFQRRDSCQRCGDSKYXXXXXXXXXXXXXXXXXXXXXXXXXVRPGDWYC 64
          GDW C  C+H+NF++R++CQ C   KY                            GDW+C
Sbjct: 6  GDWMCGVCEHINFKKRETCQSCRYPKYGGTDPSTYRYNKTE-----------ALAGDWFC 54

Query: 65 AAANCGAHNFASRSSCFKCGAFKD 88
             NCGAHN+ SRSSC++CGA KD
Sbjct: 55 ---NCGAHNYVSRSSCYRCGAIKD 75