Miyakogusa Predicted Gene

Lj0g3v0147699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147699.1 tr|F2CQW9|F2CQW9_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,47.87,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; DUF1421,Protein of unknown function
DUF14,NODE_31384_length_703_cov_162.046936.path2.1
         (217 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g45800.1                                                       265   4e-71
Glyma12g12740.1                                                       252   2e-67
Glyma12g12740.2                                                       251   3e-67
Glyma13g37300.1                                                       240   8e-64
Glyma12g33150.1                                                       238   5e-63
Glyma19g00490.1                                                        78   9e-15
Glyma05g08930.2                                                        77   1e-14
Glyma05g08930.1                                                        77   1e-14

>Glyma06g45800.1 
          Length = 468

 Score =  265 bits (676), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 128/172 (74%), Positives = 144/172 (83%), Gaps = 3/172 (1%)

Query: 1   MASGPSGLSNCSSKGFDFRSDDVLCSYEDFTEQDS-SNGNNIDPSKDFHISRMTKAAALP 59
           MASG SG  N +SKGFDF SDD+LCSY+D+  +DS SNGN+ DP  DFH SRM + +  P
Sbjct: 1   MASGSSGRGNSASKGFDFASDDILCSYDDYANRDSTSNGNHTDP--DFHKSRMARTSMFP 58

Query: 60  ATAYGSPEGSLGQDVIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRS 119
            TAY  PE SL QDVIATVEKS+K Y+DNLMRFLEGI SRLSQLELYCYNLDKSIGEM+S
Sbjct: 59  TTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKS 118

Query: 120 DLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE 171
           D+N DH E DS+LKS+EKHVQEVHRSVQIL+DKQELA+ QKELAKLQL QKE
Sbjct: 119 DINRDHVEQDSRLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKE 170


>Glyma12g12740.1 
          Length = 534

 Score =  252 bits (644), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 125/172 (72%), Positives = 141/172 (81%), Gaps = 6/172 (3%)

Query: 1   MASGPSGLSNCSSKGFDFRSDDVLCSYEDFTEQDSS-NGNNIDPSKDFHISRMTKAAALP 59
           MASG SG  N +SKGFDF SDD+LCSY+D+  +DSS NGN+ DP +DFH SR       P
Sbjct: 1   MASGSSGRGNSASKGFDFASDDILCSYDDYANRDSSSNGNHTDP-QDFHKSRRM----FP 55

Query: 60  ATAYGSPEGSLGQDVIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRS 119
            TAY  PE SL QDVIATVEKS+K Y+DNLMRFLEGI SRLSQLELYCYNLDKSIGEM+ 
Sbjct: 56  TTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKC 115

Query: 120 DLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE 171
           D+N DH E +S+LKS+EKHVQEVHRSVQIL+DKQELA+ QKELAKLQL QKE
Sbjct: 116 DINRDHVEQESRLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKE 167


>Glyma12g12740.2 
          Length = 533

 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 125/172 (72%), Positives = 140/172 (81%), Gaps = 7/172 (4%)

Query: 1   MASGPSGLSNCSSKGFDFRSDDVLCSYEDFTEQDSS-NGNNIDPSKDFHISRMTKAAALP 59
           MASG SG  N +SKGFDF SDD+LCSY+D+  +DSS NGN+ DP  DFH SR       P
Sbjct: 1   MASGSSGRGNSASKGFDFASDDILCSYDDYANRDSSSNGNHTDP--DFHKSRRM----FP 54

Query: 60  ATAYGSPEGSLGQDVIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRS 119
            TAY  PE SL QDVIATVEKS+K Y+DNLMRFLEGI SRLSQLELYCYNLDKSIGEM+ 
Sbjct: 55  TTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMKC 114

Query: 120 DLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE 171
           D+N DH E +S+LKS+EKHVQEVHRSVQIL+DKQELA+ QKELAKLQL QKE
Sbjct: 115 DINRDHVEQESRLKSLEKHVQEVHRSVQILRDKQELAETQKELAKLQLAQKE 166


>Glyma13g37300.1 
          Length = 454

 Score =  240 bits (613), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 119/173 (68%), Positives = 139/173 (80%), Gaps = 2/173 (1%)

Query: 1   MASGPSGLSNCSSKGFDFRSDDVLCSY--EDFTEQDSSNGNNIDPSKDFHISRMTKAAAL 58
           MAS PSG SN  S GFD  S D+L SY  ED+T  DSSNG +IDP+KD H SRM + + +
Sbjct: 1   MASLPSGRSNGGSNGFDLGSGDILYSYDEEDYTNHDSSNGTHIDPTKDSHASRMGRTSIV 60

Query: 59  PATAYGSPEGSLGQDVIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMR 118
           PATAY   E SL QDVIATVEKS+KT++DNLM+FLEG+G+RLSQLELYCYNLDKSIG MR
Sbjct: 61  PATAYSPSEDSLSQDVIATVEKSMKTHADNLMQFLEGLGTRLSQLELYCYNLDKSIGAMR 120

Query: 119 SDLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE 171
           SDL  DHEE DSKL S++KH+QEVHRSV ILKD+QELA+ +KELA L+  QKE
Sbjct: 121 SDLTCDHEETDSKLNSLDKHLQEVHRSVLILKDRQELAETRKELAMLKHAQKE 173


>Glyma12g33150.1 
          Length = 532

 Score =  238 bits (606), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 118/172 (68%), Positives = 139/172 (80%), Gaps = 1/172 (0%)

Query: 1   MASGPSGLSNCSSKGFDFRSDDVLCSYE-DFTEQDSSNGNNIDPSKDFHISRMTKAAALP 59
           MAS PS  SN  S GFD  S D+LCSYE D T  DSS+G +IDP+K  H SRM + + +P
Sbjct: 1   MASLPSSRSNGGSNGFDLGSGDILCSYEEDNTNHDSSDGTHIDPAKGSHASRMARTSVVP 60

Query: 60  ATAYGSPEGSLGQDVIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRS 119
           ATAY S E SL QDVIA VEKS+KT++DNLMRFLEG+ +RLSQLELYCYNLDKSIG M+S
Sbjct: 61  ATAYSSSEDSLSQDVIAIVEKSMKTHADNLMRFLEGLSTRLSQLELYCYNLDKSIGAMQS 120

Query: 120 DLNSDHEEADSKLKSIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE 171
           DL  DHEE DSKLKS++KH+QEVHRSV IL+DKQELA+ +KELAKL+ V+KE
Sbjct: 121 DLTCDHEETDSKLKSLDKHLQEVHRSVLILRDKQELAETRKELAKLKHVRKE 172


>Glyma19g00490.1 
          Length = 578

 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 65/94 (69%)

Query: 74  VIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRSDLNSDHEEADSKLK 133
           +++ +++++K + +N++  LEG+ +RL+QLE   ++L+ S+ +++  + + H   D KL+
Sbjct: 142 MLSEIDRTVKKHMENMLHVLEGVSARLTQLETRTHHLENSVDDLKVSVGNSHGSTDGKLR 201

Query: 134 SIEKHVQEVHRSVQILKDKQELADAQKELAKLQL 167
            +E  ++EV   VQ +KDKQ++  AQ +LAKL++
Sbjct: 202 QMENSLREVQSGVQTIKDKQDIVQAQLQLAKLEV 235


>Glyma05g08930.2 
          Length = 949

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 68/98 (69%)

Query: 74  VIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRSDLNSDHEEADSKLK 133
           +++ +++++K + +N++  LEG+ +RL+QLE   ++L+ S+ +++  + ++H   D KL+
Sbjct: 513 MLSEIDRTMKKHMENMLHVLEGVSARLTQLETRTHHLENSVDDLKVSVGNNHGSTDGKLR 572

Query: 134 SIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE 171
            +E  ++EV   VQ +KDKQ++  AQ +LAKLQ+ + +
Sbjct: 573 QLENILREVQSGVQTIKDKQDIVQAQLQLAKLQVSKTD 610


>Glyma05g08930.1 
          Length = 949

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 68/98 (69%)

Query: 74  VIATVEKSIKTYSDNLMRFLEGIGSRLSQLELYCYNLDKSIGEMRSDLNSDHEEADSKLK 133
           +++ +++++K + +N++  LEG+ +RL+QLE   ++L+ S+ +++  + ++H   D KL+
Sbjct: 513 MLSEIDRTMKKHMENMLHVLEGVSARLTQLETRTHHLENSVDDLKVSVGNNHGSTDGKLR 572

Query: 134 SIEKHVQEVHRSVQILKDKQELADAQKELAKLQLVQKE 171
            +E  ++EV   VQ +KDKQ++  AQ +LAKLQ+ + +
Sbjct: 573 QLENILREVQSGVQTIKDKQDIVQAQLQLAKLQVSKTD 610