Miyakogusa Predicted Gene

Lj0g3v0147459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147459.1 Non Chatacterized Hit- tr|H0ZJ82|H0ZJ82_TAEGU
Uncharacterized protein OS=Taeniopygia guttata
GN=LRRC,44.83,3e-18,seg,NULL; no description,NULL; LRR_4,Leucine rich
repeat 4; L domain-like,NULL; LEUCINE-RICH REPEAT-,CUFF.9003.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g35440.1                                                       146   4e-36
Glyma13g35440.2                                                       146   4e-36
Glyma12g35110.1                                                       139   1e-33

>Glyma13g35440.1 
          Length = 583

 Score =  146 bits (369), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 78/109 (71%)

Query: 1   MDRVLKAAXXXXXXXXXXXXXXEVPDEVYRNLEGLGSDDKWWEAAELQKLVLAHNCIESL 60
           MDR+LKAA              E+PDEVYRNLEGLG DDKWWEAAELQKL+LAHN I SL
Sbjct: 1   MDRILKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGDDKWWEAAELQKLILAHNSIASL 60

Query: 61  KEDIKNLPFXXXXXXXXXXXXXXPAAIGELPQLKMLDVSFNSIVRIPDE 109
           KED++NLPF              PAAIGELPQLKMLDVSFNSIV+IP+E
Sbjct: 61  KEDLRNLPFLSVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVKIPEE 109


>Glyma13g35440.2 
          Length = 558

 Score =  146 bits (369), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 71/109 (65%), Positives = 78/109 (71%)

Query: 1   MDRVLKAAXXXXXXXXXXXXXXEVPDEVYRNLEGLGSDDKWWEAAELQKLVLAHNCIESL 60
           MDR+LKAA              E+PDEVYRNLEGLG DDKWWEAAELQKL+LAHN I SL
Sbjct: 1   MDRILKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGDDKWWEAAELQKLILAHNSIASL 60

Query: 61  KEDIKNLPFXXXXXXXXXXXXXXPAAIGELPQLKMLDVSFNSIVRIPDE 109
           KED++NLPF              PAAIGELPQLKMLDVSFNSIV+IP+E
Sbjct: 61  KEDLRNLPFLSVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVKIPEE 109


>Glyma12g35110.1 
          Length = 586

 Score =  139 bits (349), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/110 (63%), Positives = 76/110 (69%), Gaps = 1/110 (0%)

Query: 1   MDRVLKAAXXXXXXXXXXXXXXEVPDEVYRNLEGLGS-DDKWWEAAELQKLVLAHNCIES 59
           MDR+LKAA              E+PDEVYRNLEGLG  DDKWWEA ELQKL+LAHN I S
Sbjct: 1   MDRLLKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGGDDKWWEAVELQKLILAHNSIAS 60

Query: 60  LKEDIKNLPFXXXXXXXXXXXXXXPAAIGELPQLKMLDVSFNSIVRIPDE 109
           LKED++NLPF              PAAIGELPQLKMLDVSFNSIV IP+E
Sbjct: 61  LKEDLRNLPFLAVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVNIPEE 110