Miyakogusa Predicted Gene

Lj0g3v0146299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146299.1 Non Chatacterized Hit- tr|A5BVV5|A5BVV5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,58.9,2e-19,beta-sandwich domain of Sec23/24,NULL;
zf-Sec23_Sec24,Zinc finger, Sec23/Sec24-type; PROTEIN
TRANSPO,CUFF.8919.1
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g00670.1                                                       166   5e-42
Glyma11g36760.1                                                       163   3e-41
Glyma03g22740.1                                                        96   1e-20
Glyma16g09230.1                                                        91   3e-19
Glyma18g00420.1                                                        66   7e-12

>Glyma18g00670.1 
          Length = 766

 Score =  166 bits (420), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 73/82 (89%), Positives = 80/82 (97%)

Query: 1  MSEMASTDPEGVDGVRMTWNVWPSSKVEASKCVIPLAATVAVIRPHPDIPRLPYSPLRCK 60
          MSEMAS DPEG+DGVRMTWNVWP +KVE+SKCVIPLAATVA+IRPHPDIPRLPY+PLRCK
Sbjct: 1  MSEMASPDPEGLDGVRMTWNVWPRTKVESSKCVIPLAATVALIRPHPDIPRLPYAPLRCK 60

Query: 61 TCTSALNPFARVDFTAKIWICP 82
          TC+SALNPF+RVDFTAKIWICP
Sbjct: 61 TCSSALNPFSRVDFTAKIWICP 82


>Glyma11g36760.1 
          Length = 767

 Score =  163 bits (413), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 72/82 (87%), Positives = 79/82 (96%)

Query: 1  MSEMASTDPEGVDGVRMTWNVWPSSKVEASKCVIPLAATVAVIRPHPDIPRLPYSPLRCK 60
          MSEMAS DPEG+DGVRMTWNVWP +KVE+SKCVIPLAATVA+IRPHPDIPRL Y+PLRCK
Sbjct: 1  MSEMASPDPEGLDGVRMTWNVWPRTKVESSKCVIPLAATVALIRPHPDIPRLQYAPLRCK 60

Query: 61 TCTSALNPFARVDFTAKIWICP 82
          TC+SALNPF+RVDFTAKIWICP
Sbjct: 61 TCSSALNPFSRVDFTAKIWICP 82


>Glyma03g22740.1 
          Length = 767

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/75 (57%), Positives = 51/75 (68%)

Query: 8  DPEGVDGVRMTWNVWPSSKVEASKCVIPLAATVAVIRPHPDIPRLPYSPLRCKTCTSALN 67
          D E  DGVRM WNV P +K +A   V+P++A    I+  P +P L YSPLRC+TC S LN
Sbjct: 6  DLESQDGVRMPWNVIPGTKQDAQNAVVPISAVYTPIKHFPSMPVLNYSPLRCRTCRSVLN 65

Query: 68 PFARVDFTAKIWICP 82
          PF  VDF AKIWICP
Sbjct: 66 PFCIVDFAAKIWICP 80


>Glyma16g09230.1 
          Length = 516

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 50/75 (66%)

Query: 8  DPEGVDGVRMTWNVWPSSKVEASKCVIPLAATVAVIRPHPDIPRLPYSPLRCKTCTSALN 67
          D E  DGVRM WNV P +K +A   V+P++A    I+    +P L YSPLRC+TC S LN
Sbjct: 6  DLESQDGVRMPWNVIPGTKQDAQNAVVPVSAVYTPIKHFTSMPLLNYSPLRCRTCRSVLN 65

Query: 68 PFARVDFTAKIWICP 82
          PF  VDF AKIWICP
Sbjct: 66 PFCIVDFAAKIWICP 80


>Glyma18g00420.1 
          Length = 730

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 4/74 (5%)

Query: 10 EGVDGVRMTWNVWPSSKVEASKCVIPLA-ATVAVIRPHPDIPRLPYSPLRCKTCTSALNP 68
          E V+G+R  WN W +   + +  +IPL+     ++  + ++P LPY PL C  C + LNP
Sbjct: 7  EAVEGLRWAWNSWAA---DGTNMIIPLSIMCTPLMLLNSEVPLLPYDPLLCSRCGAVLNP 63

Query: 69 FARVDFTAKIWICP 82
          +AR+D+ ++IW CP
Sbjct: 64 YARLDYQSRIWHCP 77