Miyakogusa Predicted Gene

Lj0g3v0146189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146189.1 Non Chatacterized Hit- tr|I1LNT9|I1LNT9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40241
PE,30,5e-16,seg,NULL,CUFF.8911.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g14480.1                                                       214   7e-56
Glyma12g00870.1                                                        75   1e-13

>Glyma01g14480.1 
          Length = 236

 Score =  214 bits (545), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/273 (49%), Positives = 152/273 (55%), Gaps = 43/273 (15%)

Query: 1   MGGGALHV---DHLVPQFRXXXXXXXXXXXXXXXXXXXXXXXXDDSMLFSPHNSLSC-CS 56
           MGGG +      H VPQFR                              S  N+LSC CS
Sbjct: 1   MGGGTIMTTITSHRVPQFRNTLNNFSSPSPSSSAPKLNPA--------LSTTNTLSCTCS 52

Query: 57  C-HSQFCRKMELVDGKEAKTSSGCLPDSVFGVVPSQWEVEDAVSALQEFIQAVAVSSSST 115
             H+Q C                          PSQ EVEDAVS+LQEF+QA        
Sbjct: 53  VSHTQLCTNQP---------------------APSQREVEDAVSSLQEFMQAF------- 84

Query: 116 HEQFSGSYDPRIVHSQGYRRLHDALQLLQADPAIKRLVISLSSDNAVWDAVMSHVLHQK- 174
            +Q SG YD R V S GY+RL+DA QLLQADP IKRLV+SLSSD A+WDAVMS+V HQK 
Sbjct: 85  -QQISGFYDSRGVMSHGYKRLYDAFQLLQADPTIKRLVVSLSSDKALWDAVMSNVRHQKK 143

Query: 175 LPELPDSGKYRRPQISEQNEFGLYILNWIRDIIKGKILELIESFMSLLSDLFQSPKVENA 234
           L ELPDS   RRPQI E NEFG+ IL+W  DIIKGKILELIESF SL++DLFQSPK+ NA
Sbjct: 144 LLELPDSVDCRRPQIFELNEFGIQILSWTLDIIKGKILELIESFQSLVNDLFQSPKMGNA 203

Query: 235 TENATELDEKVRXXXXXXXXXXXXXXMARFQRL 267
           T  ATE DEKVR              +AR QR 
Sbjct: 204 TTIATERDEKVRSSFLLSILILLIIIVARSQRF 236


>Glyma12g00870.1 
          Length = 289

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 93/176 (52%), Gaps = 27/176 (15%)

Query: 82  DSVFGVVPSQWEVEDAVSALQEFIQAVA------------VSSSSTHEQ-FS-------- 120
           D++FG VPS  +VE+A+  LQ+   + +            V+++S  +Q FS        
Sbjct: 77  DAIFGPVPSDSDVENALITLQQVFGSASRQYVRNVDEVDHVTNTSLVDQVFSDGSETDWK 136

Query: 121 ----GSYDPRIVHSQGYRRLHDALQLLQADPAIKRLVISLSSDNAVWDAVMSHVLHQKLP 176
                SY+PR++ +  + ++  A+ LLQ+D  ++R+V SLSSD ++WDAV+ +   ++L 
Sbjct: 137 EPSLSSYNPRMLQTDVFDKVTFAVHLLQSDACVQRMVKSLSSDKSLWDAVLKNESVRELR 196

Query: 177 ELPDSGKYRRPQISEQNEF--GLYILNWIRDIIKGKILELIESFMSLLSDLFQSPK 230
               + + R    +  NE      +   I D  KGK++E I+  M ++ +LFQS +
Sbjct: 197 STITAERDRSSNETVDNESPNTKNVFMRISDAAKGKLMEAIQKIMKMMKNLFQSTR 252