Miyakogusa Predicted Gene

Lj0g3v0145859.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0145859.1 tr|A9RX21|A9RX21_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_105339,46.73,0.000000000000005,GLYCOSYLTRANSFERASE 1
FAMILY,NULL; GLYCOSYLTRANSFERASE,NULL; seg,NULL,CUFF.8888.1
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g12120.1                                                       150   5e-37
Glyma17g33780.1                                                       149   2e-36
Glyma17g11720.1                                                        59   3e-09
Glyma13g23150.1                                                        58   4e-09

>Glyma14g12120.1 
          Length = 530

 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/182 (51%), Positives = 111/182 (60%), Gaps = 12/182 (6%)

Query: 1   MHNPVTTREPSSVLDLGSQIRRFTLDSTFLNPSSDTCSSVLSNFLYFN-NTTTVARGAKR 59
           M+N V+ +E S +LDL S + RF  DS      SD   ++LSNFL+FN NT T A  AKR
Sbjct: 1   MNNGVS-QESSVLLDLASHVNRFAFDSF----RSDNNKTLLSNFLHFNGNTRTGAAAAKR 55

Query: 60  GVSVSLRAGG--LPFRRILHDFNSAVRFHCERIPIGFASLRVXXXXXXXXXXXXXXXXXX 117
           GVS+  + GG  + F  IL+DFN AVRFHCE+IPIGFASLRV                  
Sbjct: 56  GVSLGGKVGGASVRFGNILNDFNRAVRFHCEKIPIGFASLRVGDGGDGADGNGNGEGNGV 115

Query: 118 XXXXXXXXXXXXXXXXXQLSGADGDRPKKVLILMSDTGGGHRASAEAIKAAFYEEFGDGY 177
                              +G +G++PKKVLILMSDTGGGHRASAEAIKAAFY+EFGD Y
Sbjct: 116 RVDECGGVENEGFRG----NGVEGEKPKKVLILMSDTGGGHRASAEAIKAAFYQEFGDDY 171

Query: 178 QV 179
           QV
Sbjct: 172 QV 173


>Glyma17g33780.1 
          Length = 530

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 107/181 (59%), Gaps = 10/181 (5%)

Query: 1   MHNPVTTREPSSVLDLGSQIRRFTLDSTFLNPSSDTCSSVLSNFLYFNNTTTVARGAKRG 60
           M+N V+ +E   +LDL S + RF  DS       +  +++LSNF  FNNT T     KR 
Sbjct: 1   MNNGVS-QESGVLLDLASHVNRFAFDS--FRSDYNNSNTLLSNFSQFNNTRTGEAAVKRS 57

Query: 61  VSVSLRAGG--LPFRRILHDFNSAVRFHCERIPIGFASLRVXXXXXXXXXXXXXXXXXXX 118
           VS+ L+ GG  + FR IL+DFN AVRFHCE+IPIGFASLRV                   
Sbjct: 58  VSLGLKVGGASVRFRNILNDFNRAVRFHCEKIPIGFASLRVGDGDGDGNGADGNGNGVRV 117

Query: 119 XXXXXXXXXXXXXXXXQLSGADGDRPKKVLILMSDTGGGHRASAEAIKAAFYEEFGDGYQ 178
                             +G +G++PKKVLILMSDTGGGHRASAEAIKAAFY+EFGD YQ
Sbjct: 118 DECSGVENEGFRG-----NGVEGEKPKKVLILMSDTGGGHRASAEAIKAAFYQEFGDDYQ 172

Query: 179 V 179
           V
Sbjct: 173 V 173


>Glyma17g11720.1 
          Length = 456

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 34/45 (75%)

Query: 135 QLSGADGDRPKKVLILMSDTGGGHRASAEAIKAAFYEEFGDGYQV 179
           +L     +R K VLILMSDTGGGHRASAEAI+ AF  +FGD Y++
Sbjct: 48  ELMEIGAERTKNVLILMSDTGGGHRASAEAIRDAFQIQFGDEYRI 92


>Glyma13g23150.1 
          Length = 453

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 33/45 (73%)

Query: 135 QLSGADGDRPKKVLILMSDTGGGHRASAEAIKAAFYEEFGDGYQV 179
           +L      R K VLILMSDTGGGHRASAEAI+ AF  +FGD Y++
Sbjct: 45  ELMEIGAQRTKNVLILMSDTGGGHRASAEAIRDAFQIQFGDEYRI 89