Miyakogusa Predicted Gene
- Lj0g3v0145439.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0145439.1 tr|G7IYW1|G7IYW1_MEDTR Uridine 5'-monophosphate
synthase OS=Medicago truncatula GN=MTR_3g017580 PE=3,93.72,0,no
description,NULL; no description,Aldolase-type TIM barrel; seg,NULL;
OMPdecase,Orotidine 5'-phosp,CUFF.8877.1
(478 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g21530.2 843 0.0
Glyma11g21530.1 843 0.0
Glyma13g26870.1 790 0.0
Glyma17g01620.1 599 e-171
Glyma20g01860.1 255 9e-68
Glyma20g02050.1 171 2e-42
Glyma13g32420.1 70 4e-12
>Glyma11g21530.2
Length = 478
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/477 (86%), Positives = 428/477 (89%)
Query: 1 MSASSLKESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLHXXXXXXXXXX 60
M+ SL ESLVLQLHEISAVKFGNFKLKSGI SPIYIDLRLIISYPSLL
Sbjct: 1 MTTPSLVESLVLQLHEISAVKFGNFKLKSGIFSPIYIDLRLIISYPSLLQQISQTLISSV 60
Query: 61 XXXXFDVVCGVPYTALPIATSVSLAQNIPMVMRRKEVKDYGTAKAIEGDFEPGQSCLIIE 120
FD+VCGVPYTALPIAT VSLAQNIPMVMRRKE+KDYGTAKAIEGDF+PGQSCLIIE
Sbjct: 61 SSTSFDLVCGVPYTALPIATCVSLAQNIPMVMRRKEIKDYGTAKAIEGDFKPGQSCLIIE 120
Query: 121 DLVTSGTSVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180
DLVTSGTSVLETAAPLR+VGLKI+DAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL
Sbjct: 121 DLVTSGTSVLETAAPLRAVGLKISDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180
Query: 181 KDHGKLDEEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKRLFEI 240
+HGKLDEEMVGVVT+FL++NRKVA++AKVEKP TK KAL F ER+KLSKNP GKRLFEI
Sbjct: 181 GNHGKLDEEMVGVVTKFLEDNRKVAALAKVEKPVTKVKALPFGERAKLSKNPMGKRLFEI 240
Query: 241 MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN 300
MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDI PDFT DFGSKLLSIAEKHN
Sbjct: 241 MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDIFPDFTADFGSKLLSIAEKHN 300
Query: 301 FLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDXXXXXXXXXXXXXX 360
FLIFEDRKFADIGNTVTMQYEGG+F ILDWAHIVNAHIISGPGIVD
Sbjct: 301 FLIFEDRKFADIGNTVTMQYEGGVFRILDWAHIVNAHIISGPGIVDGLKLKGLPRGRGLL 360
Query: 361 XXAEMSSAGNFAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420
AEMSSAGN AKGDYT +AVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM
Sbjct: 361 LLAEMSSAGNLAKGDYTTSAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420
Query: 421 VTGGDALGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKC 477
VTGGDALGQQYNTPYSV+HDRGSDIIIVGRGIIKAANPAE A EYRLQGWNAYLAKC
Sbjct: 421 VTGGDALGQQYNTPYSVIHDRGSDIIIVGRGIIKAANPAEIAREYRLQGWNAYLAKC 477
>Glyma11g21530.1
Length = 478
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/477 (86%), Positives = 428/477 (89%)
Query: 1 MSASSLKESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLHXXXXXXXXXX 60
M+ SL ESLVLQLHEISAVKFGNFKLKSGI SPIYIDLRLIISYPSLL
Sbjct: 1 MTTPSLVESLVLQLHEISAVKFGNFKLKSGIFSPIYIDLRLIISYPSLLQQISQTLISSV 60
Query: 61 XXXXFDVVCGVPYTALPIATSVSLAQNIPMVMRRKEVKDYGTAKAIEGDFEPGQSCLIIE 120
FD+VCGVPYTALPIAT VSLAQNIPMVMRRKE+KDYGTAKAIEGDF+PGQSCLIIE
Sbjct: 61 SSTSFDLVCGVPYTALPIATCVSLAQNIPMVMRRKEIKDYGTAKAIEGDFKPGQSCLIIE 120
Query: 121 DLVTSGTSVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180
DLVTSGTSVLETAAPLR+VGLKI+DAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL
Sbjct: 121 DLVTSGTSVLETAAPLRAVGLKISDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180
Query: 181 KDHGKLDEEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKRLFEI 240
+HGKLDEEMVGVVT+FL++NRKVA++AKVEKP TK KAL F ER+KLSKNP GKRLFEI
Sbjct: 181 GNHGKLDEEMVGVVTKFLEDNRKVAALAKVEKPVTKVKALPFGERAKLSKNPMGKRLFEI 240
Query: 241 MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN 300
MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDI PDFT DFGSKLLSIAEKHN
Sbjct: 241 MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDIFPDFTADFGSKLLSIAEKHN 300
Query: 301 FLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDXXXXXXXXXXXXXX 360
FLIFEDRKFADIGNTVTMQYEGG+F ILDWAHIVNAHIISGPGIVD
Sbjct: 301 FLIFEDRKFADIGNTVTMQYEGGVFRILDWAHIVNAHIISGPGIVDGLKLKGLPRGRGLL 360
Query: 361 XXAEMSSAGNFAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420
AEMSSAGN AKGDYT +AVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM
Sbjct: 361 LLAEMSSAGNLAKGDYTTSAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420
Query: 421 VTGGDALGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKC 477
VTGGDALGQQYNTPYSV+HDRGSDIIIVGRGIIKAANPAE A EYRLQGWNAYLAKC
Sbjct: 421 VTGGDALGQQYNTPYSVIHDRGSDIIIVGRGIIKAANPAEIAREYRLQGWNAYLAKC 477
>Glyma13g26870.1
Length = 468
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/471 (81%), Positives = 416/471 (88%), Gaps = 4/471 (0%)
Query: 8 ESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLHXXXXXXXXXXXXXXFDV 67
ESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRL ISYPS+L FD+
Sbjct: 2 ESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLAISYPSVLRNISQTLISSVSSTSFDL 61
Query: 68 VCGVPYTALPIATSVSLAQNIPMVMRRKEVKDYGTAKAIEGDFEPGQSCLIIEDLVTSGT 127
VCGVPYTALPIAT VS+ QNIPMVMRRKE+KDYGT+KAIEGDF+ GQSCLIIEDLVTSGT
Sbjct: 62 VCGVPYTALPIATCVSVTQNIPMVMRRKEIKDYGTSKAIEGDFKHGQSCLIIEDLVTSGT 121
Query: 128 SVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKILKDHGKLD 187
SVLETAAPLR+ GLK++DAVVLIDREQGGRENLE NGIKLHAI+KLTEMVKIL++ GKLD
Sbjct: 122 SVLETAAPLRATGLKVSDAVVLIDREQGGRENLESNGIKLHAILKLTEMVKILREKGKLD 181
Query: 188 EEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKRLFEIMAEKESN 247
++M+GVV RFL+EN+KVA++A T K KA +F+ER+KLSKNPTGKRLFEIMA+KESN
Sbjct: 182 KQMLGVVMRFLEENQKVAALAT----TAKVKAFTFMERAKLSKNPTGKRLFEIMAKKESN 237
Query: 248 LCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHNFLIFEDR 307
LCLAADVGTAAELLEIA+KVGPEICLLKTHVDILPDFTPDFGSKL IAEKHNFLIFEDR
Sbjct: 238 LCLAADVGTAAELLEIADKVGPEICLLKTHVDILPDFTPDFGSKLRLIAEKHNFLIFEDR 297
Query: 308 KFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDXXXXXXXXXXXXXXXXAEMSS 367
KFADIGNTVTMQYEGGIFHIL+WA IVNAHIISGPGIV+ AEMSS
Sbjct: 298 KFADIGNTVTMQYEGGIFHILEWADIVNAHIISGPGIVEGLKLKGLPRGRGLLLLAEMSS 357
Query: 368 AGNFAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDAL 427
AGN AKGDYT AAVKIAEDHSDFVIGFISVNPASWPGAPINPSF+ ATPGVQMVTGGDAL
Sbjct: 358 AGNLAKGDYTTAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFVHATPGVQMVTGGDAL 417
Query: 428 GQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKCA 478
GQQY+TP+SVV+D GSDIIIVGRGIIKAANPA+AA EYRLQGWNAYLAKC+
Sbjct: 418 GQQYSTPHSVVYDGGSDIIIVGRGIIKAANPAQAAREYRLQGWNAYLAKCS 468
>Glyma17g01620.1
Length = 392
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 326/477 (68%), Positives = 340/477 (71%), Gaps = 86/477 (18%)
Query: 1 MSASSLKESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLHXXXXXXXXXX 60
MSASSL ES VLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLL
Sbjct: 1 MSASSLIESPVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLQQISQTLISSV 60
Query: 61 XXXXFDVVCGVPYTALPIATSVSLAQNIPMVMRRKEVKDYGTAKAIEGDFEPGQSCLIIE 120
FD+V GVP+TAL IAT VSLAQ IPM PGQSCLIIE
Sbjct: 61 SSTSFDLVSGVPFTALAIATCVSLAQTIPM---------------------PGQSCLIIE 99
Query: 121 DLVTSGTSVLETAAPLRSVGLKITDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKIL 180
DLVTSGTSVLETAAPL + GLKI+DAV + R MVKIL
Sbjct: 100 DLVTSGTSVLETAAPLPASGLKISDAVRIWRR-----------------------MVKIL 136
Query: 181 KDHGKLDEEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKRLFEI 240
+HGKLDEEM N+KVA++AKV KP TK KALSF ER+KLSKNP GKRLFEI
Sbjct: 137 SNHGKLDEEM----------NQKVAALAKVGKPATKVKALSFGERAKLSKNPIGKRLFEI 186
Query: 241 MAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHN 300
MAEKESNLCLAADVGTAAELLEIA KVGPEICLLKTHVDI PDFTPDFGS LLSIAEKHN
Sbjct: 187 MAEKESNLCLAADVGTAAELLEIAGKVGPEICLLKTHVDIFPDFTPDFGSMLLSIAEKHN 246
Query: 301 FLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIVDXXXXXXXXXXXXXX 360
FLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGI
Sbjct: 247 FLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGIG-------LPRGRGLL 299
Query: 361 XXAEMSSAGNFAKGDYTAAAVKIAEDHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 420
AEMSSAGN AKGDYT AA+KIAE+HSDFVIGFISVNPASWPGAPINPSFIQATPGVQM
Sbjct: 300 LLAEMSSAGNLAKGDYTTAALKIAENHSDFVIGFISVNPASWPGAPINPSFIQATPGVQM 359
Query: 421 VTGGDALGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRLQGWNAYLAKC 477
VTGGDALGQ I+I+ AA EYRLQGWNAYLAKC
Sbjct: 360 VTGGDALGQH--------------ILIL-----------SAAREYRLQGWNAYLAKC 391
>Glyma20g01860.1
Length = 181
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 129/168 (76%), Positives = 137/168 (81%), Gaps = 16/168 (9%)
Query: 177 VKILKDHGKLDEEMVGVVTRFLDENRKVASVAKVEKPTTKAKALSFVERSKLSKNPTGKR 236
VKIL +HGKLDEEMV A++ KVEKP KALSF ER+KL P G+R
Sbjct: 1 VKILSNHGKLDEEMV-------------AALTKVEKPV---KALSFGERAKLLNYPMGQR 44
Query: 237 LFEIMAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIA 296
LFEIMAEKESN+CLAADVGT AELLEIAEKVGPEICLLKTHVDI PDFT DFGS LLSIA
Sbjct: 45 LFEIMAEKESNMCLAADVGTGAELLEIAEKVGPEICLLKTHVDIFPDFTADFGSNLLSIA 104
Query: 297 EKHNFLIFEDRKFADIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGI 344
EK NFLIFEDRKFADIGNT+TMQYEGG+F ILDWAHIVN HIISGPGI
Sbjct: 105 EKDNFLIFEDRKFADIGNTMTMQYEGGVFRILDWAHIVNVHIISGPGI 152
>Glyma20g02050.1
Length = 154
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 107/154 (69%), Gaps = 21/154 (13%)
Query: 212 KPTTKAKALSFVERSKLSKNPTGKRLFEIMAEKESNLCLAADVGTAAELLEIAEK----- 266
+P TK KALSF ER+KL NP G+RLFEIMAEKESN+CLAA+VGT A+LLEI EK
Sbjct: 1 QPVTKVKALSFGERAKLLNNPMGQRLFEIMAEKESNMCLAANVGTGAKLLEIFEKCYFVH 60
Query: 267 --------VGPEICLLKTHVDILPD--------FTPDFGSKLLSIAEKHNFLIFEDRKFA 310
+ I L T++++L D F ++ L IAEK+NFLIFEDRKF
Sbjct: 61 LDHQLAIRLAMIIYFLLTNLNVLKDALLCLYAFFPSQDSTRNLLIAEKYNFLIFEDRKFD 120
Query: 311 DIGNTVTMQYEGGIFHILDWAHIVNAHIISGPGI 344
+IGNT+TMQYEGG+F ILDWAHIVN HIISGP I
Sbjct: 121 NIGNTMTMQYEGGVFRILDWAHIVNVHIISGPRI 154
>Glyma13g32420.1
Length = 185
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 33/37 (89%)
Query: 363 AEMSSAGNFAKGDYTAAAVKIAEDHSDFVIGFISVNP 399
AEMSSAGN AKGDYTA VKI EDHSDF+IGFISVNP
Sbjct: 128 AEMSSAGNLAKGDYTATIVKITEDHSDFIIGFISVNP 164