Miyakogusa Predicted Gene

Lj0g3v0144389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0144389.1 tr|I7LZP3|I7LZP3_TETTS CAP-Gly domain containing
protein OS=Tetrahymena thermophila (strain SB210)
G,36.96,3e-18,Ubiquitin-like,NULL; seg,NULL; no description,NULL;
DYNACTIN 1-RELATED MICROTUBULE-BINDING,NULL,CUFF.8761.1
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g38210.2                                                       263   5e-71
Glyma05g38210.1                                                       262   2e-70

>Glyma05g38210.2 
          Length = 174

 Score =  263 bits (673), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 127/160 (79%), Positives = 140/160 (87%)

Query: 1   MASSLQKIDGDETVLLRVTHSNLKTFNPDIRFSLQLTVEAVKEKLWKKCGTSVNSMHLEL 60
           MASS+Q+++GDE+V+LRVTHSNLKTF  DIRFSL LTVEAVK+KLWKKCGTSVNSMHL+L
Sbjct: 1   MASSIQQVEGDESVVLRVTHSNLKTFASDIRFSLHLTVEAVKDKLWKKCGTSVNSMHLQL 60

Query: 61  YDDTHVKITDLTDNSKPLGFYSPLDGFRLHVVDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDD   KI DL+D+SKPL FYSPLDGFRLHVVDLDPSSVTSGGWLEDTSLVEKY ISEEA
Sbjct: 61  YDDARNKIADLSDHSKPLAFYSPLDGFRLHVVDLDPSSVTSGGWLEDTSLVEKYTISEEA 120

Query: 121 FNKREGTFRKYKEKLTSQIPSNVEAKIPDNYMEDLCVDIK 160
           +NKR  TFRKYKEK TSQ  +  EAKIPD+ M DL  DIK
Sbjct: 121 YNKRPDTFRKYKEKFTSQNTATAEAKIPDDCMGDLSADIK 160


>Glyma05g38210.1 
          Length = 243

 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 127/160 (79%), Positives = 140/160 (87%)

Query: 1   MASSLQKIDGDETVLLRVTHSNLKTFNPDIRFSLQLTVEAVKEKLWKKCGTSVNSMHLEL 60
           MASS+Q+++GDE+V+LRVTHSNLKTF  DIRFSL LTVEAVK+KLWKKCGTSVNSMHL+L
Sbjct: 1   MASSIQQVEGDESVVLRVTHSNLKTFASDIRFSLHLTVEAVKDKLWKKCGTSVNSMHLQL 60

Query: 61  YDDTHVKITDLTDNSKPLGFYSPLDGFRLHVVDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDD   KI DL+D+SKPL FYSPLDGFRLHVVDLDPSSVTSGGWLEDTSLVEKY ISEEA
Sbjct: 61  YDDARNKIADLSDHSKPLAFYSPLDGFRLHVVDLDPSSVTSGGWLEDTSLVEKYTISEEA 120

Query: 121 FNKREGTFRKYKEKLTSQIPSNVEAKIPDNYMEDLCVDIK 160
           +NKR  TFRKYKEK TSQ  +  EAKIPD+ M DL  DIK
Sbjct: 121 YNKRPDTFRKYKEKFTSQNTATAEAKIPDDCMGDLSADIK 160