Miyakogusa Predicted Gene
- Lj0g3v0142579.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0142579.1 Non Chatacterized Hit- tr|B9T1T7|B9T1T7_RICCO
NOI, putative OS=Ricinus communis GN=RCOM_0691110
PE=4,70.89,2e-19,AvrRpt-cleavage,Pathogenic type III effector
avirulence factor Avr cleavage site,CUFF.8714.1
(77 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g08410.1 124 3e-29
Glyma08g44290.1 108 2e-24
Glyma02g47070.1 105 1e-23
Glyma17g27200.1 102 1e-22
Glyma10g14870.1 100 3e-22
Glyma17g27150.1 96 7e-21
Glyma17g23670.1 91 4e-19
Glyma02g47830.1 89 9e-19
Glyma14g01680.1 86 8e-18
Glyma05g02930.1 82 2e-16
Glyma01g24790.1 75 1e-14
Glyma12g11010.1 73 7e-14
Glyma11g37530.1 72 1e-13
Glyma06g34230.1 72 1e-13
Glyma06g38350.1 71 2e-13
Glyma18g43890.1 71 3e-13
Glyma17g13590.1 71 3e-13
Glyma18g01480.1 70 4e-13
Glyma04g26660.1 70 4e-13
Glyma16g12160.1 62 2e-10
Glyma03g19920.1 60 5e-10
Glyma08g46400.1 59 1e-09
Glyma08g46400.2 59 1e-09
Glyma18g36000.1 58 2e-09
>Glyma18g08410.1
Length = 79
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 71/79 (89%), Gaps = 2/79 (2%)
Query: 1 MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDP 59
MS+KGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGG+ +SPGKTAT SKPA++P
Sbjct: 1 MSEKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEP 60
Query: 60 GKPQSKKWFCCV-NPPAES 77
GK Q++KWFCC+ NP AES
Sbjct: 61 GKTQTEKWFCCMQNPSAES 79
>Glyma08g44290.1
Length = 104
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 61/70 (87%), Gaps = 1/70 (1%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGK 61
+KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG+ ESPGKTAT SKPA++PGK
Sbjct: 1 EKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPGKTATDPHSKPAVEPGK 60
Query: 62 PQSKKWFCCV 71
Q+ + C+
Sbjct: 61 TQTGCFLFCL 70
>Glyma02g47070.1
Length = 78
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 61/76 (80%), Gaps = 3/76 (3%)
Query: 1 MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS--ESPGKTATKTQSKPALD 58
MSD GRPLPKFGEWDVNDPASAEG+TVIFNKAR++KKTGG ESP K +T+ +P LD
Sbjct: 1 MSDTGRPLPKFGEWDVNDPASAEGYTVIFNKARNDKKTGGGKPESPAKVNPRTR-RPPLD 59
Query: 59 PGKPQSKKWFCCVNPP 74
P K QSKK FCC+ P
Sbjct: 60 PSKTQSKKCFCCIQSP 75
>Glyma17g27200.1
Length = 69
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/65 (80%), Positives = 58/65 (89%), Gaps = 1/65 (1%)
Query: 1 MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDP 59
MS+KGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGG+ +SP KTAT SKPA++P
Sbjct: 1 MSEKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPRKTATDPHSKPAVEP 60
Query: 60 GKPQS 64
GK Q+
Sbjct: 61 GKTQT 65
>Glyma10g14870.1
Length = 64
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 57/63 (90%), Gaps = 1/63 (1%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGK 61
+KGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGG+ +SPGKTAT SKPA++PGK
Sbjct: 2 EKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPGK 61
Query: 62 PQS 64
Q+
Sbjct: 62 TQT 64
>Glyma17g27150.1
Length = 63
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGK 61
+KGRPLPKFGEWDVNDP SAE FTVIFNKARDEKKTGG+ +SPGKTAT SKPA++P K
Sbjct: 1 EKGRPLPKFGEWDVNDPTSAEEFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPSK 60
Query: 62 PQS 64
Q+
Sbjct: 61 TQT 63
>Glyma17g23670.1
Length = 66
Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 49/55 (89%), Gaps = 1/55 (1%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPA 56
+KGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGG+ +SPGK AT SKPA
Sbjct: 1 EKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGNPDSPGKIATDPHSKPA 55
>Glyma02g47830.1
Length = 80
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Query: 1 MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSES---PGKTATKTQSKPAL 57
M+++GR LPKFG+WDVN+P++A+ F+VIFNKAR+E+KTG ++ P T + P +
Sbjct: 1 MAERGRALPKFGDWDVNNPSAAQDFSVIFNKARNERKTGANKIHFPPNHNNTTKCNPPQV 60
Query: 58 DPGKPQSKKWFCCVNPPAES 77
GK KKWFCC+N AES
Sbjct: 61 VLGKSHYKKWFCCINTSAES 80
>Glyma14g01680.1
Length = 62
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGK 61
D GRPLPKFGEWDVNDPASAEG+TVIFNKAR+EKKTGG +SP K +++P LDP K
Sbjct: 1 DTGRPLPKFGEWDVNDPASAEGYTVIFNKARNEKKTGGKPDSPAK-VNNPRTRPPLDPSK 59
Query: 62 PQS 64
QS
Sbjct: 60 TQS 62
>Glyma05g02930.1
Length = 72
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 50/74 (67%), Gaps = 13/74 (17%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSESPGKTATKTQSKPAL---DP 59
+ GRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT TAT +S P +
Sbjct: 5 ENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTN-------TATPRRSDPVFKNENY 57
Query: 60 GKPQS---KKWFCC 70
PQ +KWFCC
Sbjct: 58 NTPQYSGKRKWFCC 71
>Glyma01g24790.1
Length = 53
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Query: 15 DVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGKPQS 64
DVN P SAEGFTVIFNKARDEKKTGG+ +SPGKTAT SKPA++PGK Q+
Sbjct: 1 DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPGKTQT 51
>Glyma12g11010.1
Length = 55
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
Query: 15 DVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGKPQSKK 66
DVN P SAEGFTVIFNKARDEKKTGG+ +SPGKTAT SKPA++P K Q+ +
Sbjct: 1 DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPAVEPSKTQTVR 53
>Glyma11g37530.1
Length = 77
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 35/38 (92%)
Query: 4 KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS 41
+G+PLPKFGEWDVNDPASAEGFTVIFNKARDEKK +
Sbjct: 8 QGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKIASA 45
>Glyma06g34230.1
Length = 40
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/39 (87%), Positives = 35/39 (89%)
Query: 5 GRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSES 43
G+PLPKFGEWDVNDPAS E FTVIFNKARDEKKTGG S
Sbjct: 1 GKPLPKFGEWDVNDPASTEEFTVIFNKARDEKKTGGGRS 39
>Glyma06g38350.1
Length = 51
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 15 DVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGKPQS 64
DVN P SAEGFTVIFNKARDEKKTGG+ +SPGKTAT SKP ++P K Q+
Sbjct: 1 DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPVVEPDKTQT 51
>Glyma18g43890.1
Length = 55
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Query: 15 DVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGKPQSKK 66
DVN P SAEGFTVIFNKARDEKKTGG+ +SPGKTAT SKP ++P K Q+ +
Sbjct: 1 DVNHPTSAEGFTVIFNKARDEKKTGGNPDSPGKTATDPHSKPVVEPDKTQTVR 53
>Glyma17g13590.1
Length = 68
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/35 (91%), Positives = 34/35 (97%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKK 37
+ GRPLPKFGEWDVN+PASAEGFTVIFNKARDEKK
Sbjct: 4 ENGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKK 38
>Glyma18g01480.1
Length = 80
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 35/38 (92%)
Query: 4 KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGS 41
+G+PLPKFGEWDVNDPASAEGFTVIFNKARD+KK +
Sbjct: 8 QGKPLPKFGEWDVNDPASAEGFTVIFNKARDDKKIASA 45
>Glyma04g26660.1
Length = 51
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 15 DVNDPASAEGFTVIFNKARDEKKTGGS-ESPGKTATKTQSKPALDPGKPQS 64
DVN P SAEGFTVIFNKA DEKKTGG+ +SPGKTAT SKP ++PGK Q+
Sbjct: 1 DVNHPTSAEGFTVIFNKAGDEKKTGGNPDSPGKTATDPHSKPVVEPGKTQT 51
>Glyma16g12160.1
Length = 246
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSESPGKTATKTQSKPALDPGKP 62
DKG +PKFG+WDVN+PASA+GFT IFNK R+E++ G PG+ +P G
Sbjct: 175 DKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGG----PGQVPGTPNERPQPINGLS 230
Query: 63 QSKKWFCC 70
K CC
Sbjct: 231 NDDKVQCC 238
>Glyma03g19920.1
Length = 246
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSESPGKTATKTQSKPALDPGKP 62
DKG +PKFG+WDVN+P+SA+GFT IFNK R+E++ PG+ +P G+
Sbjct: 175 DKGAAVPKFGDWDVNNPSSADGFTHIFNKVREERQG----VPGQVPGTPNERPQAIRGQS 230
Query: 63 QSKKWFCC 70
K CC
Sbjct: 231 NDDKVQCC 238
>Glyma08g46400.1
Length = 248
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSESPG 45
D+G +PKFGEWD ++PASA+G+T IFNK R+EK+ G PG
Sbjct: 178 DEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPG 220
>Glyma08g46400.2
Length = 237
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSESPG 45
D+G +PKFGEWD ++PASA+G+T IFNK R+EK+ G PG
Sbjct: 167 DEGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPG 209
>Glyma18g36000.1
Length = 246
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 3 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGSE---SPGKTATKTQSKPALDP 59
DKG +PKFGEWD ++PASA+G+T IFNK R+EK+ G +P +++PA D
Sbjct: 176 DKGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPVTPNGRQYAARNQPADD- 234
Query: 60 GKPQSKKWFCC 70
K CC
Sbjct: 235 -----KAQSCC 240