Miyakogusa Predicted Gene

Lj0g3v0141259.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0141259.2 Non Chatacterized Hit- tr|B8A2V5|B8A2V5_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,55.43,4e-19,
,CUFF.8616.2
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g20470.3                                                       145   1e-35
Glyma11g20470.1                                                       145   1e-35
Glyma11g20470.2                                                       144   2e-35

>Glyma11g20470.3 
          Length = 450

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 69/77 (89%)

Query: 18 VNFSFAENDFGNCERVVKTWTHSSLDREVIHEDKHTLRDLLFFLHVPRTGGRTYFHCFLK 77
          VN SFAEND+G CE VVK+W  SSLD E+  +DKHTLRDLLFFLHVPRTGGRTYFHCFLK
Sbjct: 22 VNGSFAENDYGRCESVVKSWARSSLDEEMTKDDKHTLRDLLFFLHVPRTGGRTYFHCFLK 81

Query: 78 KLYPSYLECPRSYDKLR 94
          KLYPSYLECPRSYDKLR
Sbjct: 82 KLYPSYLECPRSYDKLR 98


>Glyma11g20470.1 
          Length = 494

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 69/77 (89%)

Query: 18 VNFSFAENDFGNCERVVKTWTHSSLDREVIHEDKHTLRDLLFFLHVPRTGGRTYFHCFLK 77
          VN SFAEND+G CE VVK+W  SSLD E+  +DKHTLRDLLFFLHVPRTGGRTYFHCFLK
Sbjct: 22 VNGSFAENDYGRCESVVKSWARSSLDEEMTKDDKHTLRDLLFFLHVPRTGGRTYFHCFLK 81

Query: 78 KLYPSYLECPRSYDKLR 94
          KLYPSYLECPRSYDKLR
Sbjct: 82 KLYPSYLECPRSYDKLR 98


>Glyma11g20470.2 
          Length = 351

 Score =  144 bits (364), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 65/77 (84%), Positives = 69/77 (89%)

Query: 18 VNFSFAENDFGNCERVVKTWTHSSLDREVIHEDKHTLRDLLFFLHVPRTGGRTYFHCFLK 77
          VN SFAEND+G CE VVK+W  SSLD E+  +DKHTLRDLLFFLHVPRTGGRTYFHCFLK
Sbjct: 22 VNGSFAENDYGRCESVVKSWARSSLDEEMTKDDKHTLRDLLFFLHVPRTGGRTYFHCFLK 81

Query: 78 KLYPSYLECPRSYDKLR 94
          KLYPSYLECPRSYDKLR
Sbjct: 82 KLYPSYLECPRSYDKLR 98