Miyakogusa Predicted Gene

Lj0g3v0141149.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0141149.1 Non Chatacterized Hit- tr|D7LA28|D7LA28_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,48.33,3e-18,
,CUFF.8619.1
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g03080.1                                                       109   6e-25
Glyma11g10800.1                                                       107   2e-24

>Glyma12g03080.1 
          Length = 888

 Score =  109 bits (273), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 66/120 (55%), Positives = 75/120 (62%), Gaps = 27/120 (22%)

Query: 1   MEALCEVLHSKQPLIVYFPDG---LHKSVPKSIQSEFFQKVQEKFELLSGPIVLICGQNK 57
           +EALCEVLH KQPLIVYFPD    LHK+VPKS ++EFF KV+E F+ LSGPIV ICGQNK
Sbjct: 322 VEALCEVLHRKQPLIVYFPDSSQWLHKAVPKSHRNEFFHKVEEMFDRLSGPIVFICGQNK 381

Query: 58  AQ--SKGQLLFSM---------------------NKGQKTSKDGEFYKPF-NVLSIQPPK 93
            Q  SK +  F+M                      KG KTS+D E  K F NVLSI PPK
Sbjct: 382 IQSGSKEKEEFTMILPNFGRVAKLPLSLKHLTEGIKGDKTSEDDEINKLFSNVLSILPPK 441


>Glyma11g10800.1 
          Length = 968

 Score =  107 bits (268), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 64/120 (53%), Positives = 75/120 (62%), Gaps = 27/120 (22%)

Query: 1   MEALCEVLHSKQPLIVYFPDG---LHKSVPKSIQSEFFQKVQEKFELLSGPIVLICGQNK 57
           +EALCEVLH +QPLIVYFPD    LHK+VPKS ++EFF KV+E F+ LSGPIV ICGQNK
Sbjct: 421 VEALCEVLHHRQPLIVYFPDSSQWLHKAVPKSNRNEFFHKVEEMFDRLSGPIVFICGQNK 480

Query: 58  AQ--SKGQLLFSM---------------------NKGQKTSKDGEFYKPF-NVLSIQPPK 93
            Q  SK +  F+M                      KG KTS+D E  K F NVLS+ PPK
Sbjct: 481 VQSGSKEKEEFTMILPNFGRVAKLPLSLKRLTEGIKGDKTSEDDEINKLFSNVLSMHPPK 540