Miyakogusa Predicted Gene

Lj0g3v0140629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0140629.1 Non Chatacterized Hit- tr|C6TFP4|C6TFP4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54676 PE,87.8,0,no
description,NULL; NTF2-like,NULL; NTF2_DOMAIN,Nuclear transport factor
2, Eukaryote; NTF2,Nuclear,CUFF.8600.1
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g11070.1                                                       233   3e-62
Glyma05g28080.1                                                       231   1e-61
Glyma11g36950.1                                                       231   2e-61
Glyma11g36950.2                                                       208   1e-54
Glyma11g36950.3                                                       185   1e-47
Glyma13g12600.1                                                       142   1e-34
Glyma02g17980.1                                                       132   9e-32
Glyma07g35200.1                                                        55   2e-08
Glyma20g03060.1                                                        53   8e-08
Glyma05g00330.1                                                        52   2e-07
Glyma17g08710.3                                                        51   3e-07
Glyma17g08710.2                                                        51   3e-07
Glyma17g08710.1                                                        51   3e-07
Glyma08g46190.1                                                        50   5e-07
Glyma08g46190.2                                                        50   6e-07
Glyma18g33150.1                                                        50   6e-07
Glyma08g27040.1                                                        49   1e-06
Glyma18g50250.1                                                        48   3e-06

>Glyma08g11070.1 
          Length = 123

 Score =  233 bits (595), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 109/123 (88%), Positives = 115/123 (93%)

Query: 1   MDPDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQKIQGSSNIVAKLTSLPFQQC 60
           MDPDALAKAFVEHYYSTFD+NR  LANLYQEGSML+FEGQKIQG+SNIVAKLTSLPFQQC
Sbjct: 1   MDPDALAKAFVEHYYSTFDTNRNGLANLYQEGSMLTFEGQKIQGASNIVAKLTSLPFQQC 60

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRL 120
           HHSI+TVDCQPSG  + MLVFVSGNLQLAGEQH L FSQMFHL+PT QGSYYVLNDIFRL
Sbjct: 61  HHSISTVDCQPSGVNAGMLVFVSGNLQLAGEQHTLKFSQMFHLIPTPQGSYYVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123


>Glyma05g28080.1 
          Length = 123

 Score =  231 bits (590), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 108/123 (87%), Positives = 115/123 (93%)

Query: 1   MDPDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQKIQGSSNIVAKLTSLPFQQC 60
           MDPDALAKAFVEHYYSTFD+NR  LANLYQEGSML+FEGQKIQG+S+IVAKLTSLPFQQC
Sbjct: 1   MDPDALAKAFVEHYYSTFDTNRNGLANLYQEGSMLTFEGQKIQGASSIVAKLTSLPFQQC 60

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRL 120
           HHSI+TVDCQPSG  + MLVFVSGNLQLAGEQH L FSQMFHL+PT QGSYYVLNDIFRL
Sbjct: 61  HHSISTVDCQPSGVNAGMLVFVSGNLQLAGEQHTLKFSQMFHLIPTPQGSYYVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123


>Glyma11g36950.1 
          Length = 123

 Score =  231 bits (588), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/123 (90%), Positives = 114/123 (92%)

Query: 1   MDPDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQKIQGSSNIVAKLTSLPFQQC 60
           MDPDALAKAFVEHYYSTFD+NR  LANLYQEGSMLSFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDALAKAFVEHYYSTFDTNRNNLANLYQEGSMLSFEGQKIQGSHNIVAKLTSLPFQQC 60

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRL 120
            HSITTVD QPSG  +AMLVFVSGNLQLAGEQHAL FSQMFHL+PT QGSYYVLNDIFRL
Sbjct: 61  QHSITTVDSQPSGVNAAMLVFVSGNLQLAGEQHALKFSQMFHLIPTPQGSYYVLNDIFRL 120

Query: 121 NYA 123
           NYA
Sbjct: 121 NYA 123


>Glyma11g36950.2 
          Length = 114

 Score =  208 bits (529), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 104/123 (84%), Positives = 106/123 (86%), Gaps = 9/123 (7%)

Query: 1   MDPDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQKIQGSSNIVAKLTSLPFQQC 60
           MDPDALAKAFVEHYYSTFD+NR  LANLYQEGSMLSFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDALAKAFVEHYYSTFDTNRNNLANLYQEGSMLSFEGQKIQGSHNIVAKLTSLPFQQC 60

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRL 120
            HSITTVD QPSG  +AMLVFVSGNLQLAGEQHAL FS         QGSYYVLNDIFRL
Sbjct: 61  QHSITTVDSQPSGVNAAMLVFVSGNLQLAGEQHALKFS---------QGSYYVLNDIFRL 111

Query: 121 NYA 123
           NYA
Sbjct: 112 NYA 114


>Glyma11g36950.3 
          Length = 116

 Score =  185 bits (469), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 89/101 (88%), Positives = 93/101 (92%)

Query: 1   MDPDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQKIQGSSNIVAKLTSLPFQQC 60
           MDPDALAKAFVEHYYSTFD+NR  LANLYQEGSMLSFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDALAKAFVEHYYSTFDTNRNNLANLYQEGSMLSFEGQKIQGSHNIVAKLTSLPFQQC 60

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMF 101
            HSITTVD QPSG  +AMLVFVSGNLQLAGEQHAL FSQ++
Sbjct: 61  QHSITTVDSQPSGVNAAMLVFVSGNLQLAGEQHALKFSQVY 101


>Glyma13g12600.1 
          Length = 89

 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 67/99 (67%), Positives = 80/99 (80%), Gaps = 10/99 (10%)

Query: 1  MDPDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQKIQGSSNIVAKLTSLPFQQC 60
          MDPD LAKA VEHYYSTFD+N+++LANL+QEGSML+FEGQKIQG S+I          QC
Sbjct: 1  MDPDMLAKAIVEHYYSTFDTNQSSLANLHQEGSMLTFEGQKIQGVSSI----------QC 50

Query: 61 HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQ 99
          HHSI+T++CQPSG   +MLVFVSGNLQL GEQH L F++
Sbjct: 51 HHSISTINCQPSGINVSMLVFVSGNLQLVGEQHILKFNE 89


>Glyma02g17980.1 
          Length = 85

 Score =  132 bits (332), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 77/99 (77%), Gaps = 14/99 (14%)

Query: 1  MDPDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQKIQGSSNIVAKLTSLPFQQC 60
          MDP+ALAKAF+EHYY+TFD++R+ LANLYQ+ SML+ +GQKIQG+SNIVAKLTS PFQQC
Sbjct: 1  MDPNALAKAFMEHYYNTFDTSRSGLANLYQQSSMLTLKGQKIQGASNIVAKLTSFPFQQC 60

Query: 61 HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQ 99
          HHSI++V+C              GNLQ+ G+QH L  SQ
Sbjct: 61 HHSISSVNC--------------GNLQITGKQHPLKLSQ 85


>Glyma07g35200.1 
          Length = 412

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 3   PDALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-----IQGSSNIVAKLTSLPF 57
           P  +  AFVE YYS        +   Y E S+LS   +      +  +  I  K+ SL +
Sbjct: 10  PQTVGNAFVEQYYSILHQKPDQVHRFYHESSILSRPEEDGTMTMVTTTLEINKKILSLDY 69

Query: 58  QQCHHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDI 117
                 I + D QPS     ++V V+G L    +     F+Q F L P  +G Y+VLND+
Sbjct: 70  TSFRVEILSADAQPS-YKDGVIVVVTGCL-TGSDNLKRKFTQSFFLAPQDKG-YFVLNDV 126

Query: 118 FR 119
           FR
Sbjct: 127 FR 128


>Glyma20g03060.1 
          Length = 465

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 6   LAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-----IQGSSNIVAKLTSLPFQQC 60
           +  AFV+ YYS        +   YQE S+LS   +      +  +  I  K+ SL +   
Sbjct: 13  IGNAFVQQYYSILHQEPDQVHRFYQESSILSRPEEDGTMTMVTTTLEINKKILSLDYTSF 72

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFR 119
              I + D QPS     ++V V+G L    +     F+Q F L P  +G Y+VLND+FR
Sbjct: 73  RVEILSADAQPS-FKDGVIVVVTGCL-TGSDNLKRKFTQSFFLAPQDKG-YFVLNDVFR 128


>Glyma05g00330.1 
          Length = 462

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 6   LAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-----IQGSSNIVAKLTSLPFQQC 60
           +  AFVE YY     +   +   YQ+ S L+          +     I  K+ SL ++  
Sbjct: 17  VGNAFVEQYYHILHQSPELVHRFYQDSSFLTRSDSNGVMTTVTTVQEIHEKIISLKYEDY 76

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRL 120
              I T D Q S     ++V V+G L    +     FSQ F L P ++G YYVLND+FR 
Sbjct: 77  TAEIKTADAQES-HKGGVIVLVTGCL-TGKDNVRRKFSQTFFLAPQEKG-YYVLNDVFRF 133


>Glyma17g08710.3 
          Length = 460

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 6   LAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-----IQGSSNIVAKLTSLPFQQC 60
           +  AFVE YY     +   +   YQ+ S L+          +     I  K+ SL ++  
Sbjct: 17  VGNAFVEQYYHILHQSPELVHRFYQDSSFLTRSDSNGVMTTVTTVQEIHEKIISLKYEDY 76

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRL 120
              I T D Q S     ++V V+G L    +     FSQ F L P ++G YYVLND+FR 
Sbjct: 77  TAEIKTADAQES-HKGGVIVLVTGCLT-GKDNVRRKFSQTFFLAPQEKG-YYVLNDVFRF 133


>Glyma17g08710.2 
          Length = 460

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 6   LAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-----IQGSSNIVAKLTSLPFQQC 60
           +  AFVE YY     +   +   YQ+ S L+          +     I  K+ SL ++  
Sbjct: 17  VGNAFVEQYYHILHQSPELVHRFYQDSSFLTRSDSNGVMTTVTTVQEIHEKIISLKYEDY 76

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRL 120
              I T D Q S     ++V V+G L    +     FSQ F L P ++G YYVLND+FR 
Sbjct: 77  TAEIKTADAQES-HKGGVIVLVTGCLT-GKDNVRRKFSQTFFLAPQEKG-YYVLNDVFRF 133


>Glyma17g08710.1 
          Length = 460

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 6   LAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-----IQGSSNIVAKLTSLPFQQC 60
           +  AFVE YY     +   +   YQ+ S L+          +     I  K+ SL ++  
Sbjct: 17  VGNAFVEQYYHILHQSPELVHRFYQDSSFLTRSDSNGVMTTVTTVQEIHEKIISLKYEDY 76

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFRL 120
              I T D Q S     ++V V+G L    +     FSQ F L P ++G YYVLND+FR 
Sbjct: 77  TAEIKTADAQES-HKGGVIVLVTGCLT-GKDNVRRKFSQTFFLAPQEKG-YYVLNDVFRF 133


>Glyma08g46190.1 
          Length = 462

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 4   DALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-IQGSS----NIVAKLTSLPFQ 58
           D +  AFV+ YY     +   +   YQ+ S L    Q  I G +    +I  K+ SL + 
Sbjct: 16  DIVGNAFVDQYYHMLHESPELVHRFYQDVSKLGRPEQNGIMGITTTMLDINKKILSLGYG 75

Query: 59  QCHHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIF 118
           +    I +VD Q S     ++V V+G   +  +     F+Q F L P ++G Y+VLND+F
Sbjct: 76  ELSAEIVSVDAQES-YDGGVIVLVTG-FMIGKDDIKQKFTQCFFLAPQEKG-YFVLNDVF 132

Query: 119 R 119
           R
Sbjct: 133 R 133


>Glyma08g46190.2 
          Length = 462

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 4   DALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-IQGSS----NIVAKLTSLPFQ 58
           D +  AFV+ YY     +   +   YQ+ S L    Q  I G +    +I  K+ SL + 
Sbjct: 16  DIVGNAFVDQYYHMLHESPELVHRFYQDVSKLGRPEQNGIMGITTTMLDINKKILSLGYG 75

Query: 59  QCHHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIF 118
           +    I +VD Q S     ++V V+G   +  +     F+Q F L P ++G Y+VLND+F
Sbjct: 76  ELSAEIVSVDAQES-YDGGVIVLVTG-FMIGKDDIKQKFTQCFFLAPQEKG-YFVLNDVF 132

Query: 119 R 119
           R
Sbjct: 133 R 133


>Glyma18g33150.1 
          Length = 384

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 4   DALAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQK-IQGSS----NIVAKLTSLPFQ 58
           D +  AFV+ YY     +   +   YQ+ S L    Q  I G +    +I  K+ SL + 
Sbjct: 16  DMVGNAFVDQYYHMLHESPELVHRFYQDVSKLGRPEQNGIMGITTTMLDINKKILSLGYG 75

Query: 59  QCHHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIF 118
           +    I +VD Q S     ++V V+G   +  +     F+Q F L P ++G Y+VLND+F
Sbjct: 76  ELSAEIVSVDAQESYG-GGVIVLVTG-FMIGKDDIKQKFTQCFFLAPQEKG-YFVLNDVF 132

Query: 119 R 119
           R
Sbjct: 133 R 133


>Glyma08g27040.1 
          Length = 430

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 8/119 (6%)

Query: 6   LAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQ-----KIQGSSNIVAKLTSLPFQQC 60
           +  AFVE YY     +  ++   YQ+ S++S          +     I  K+ SL F++ 
Sbjct: 17  VGNAFVEQYYHILHHSPGSVYRFYQDSSVISRPDSSGVMTSVTTMKGINEKILSLNFKEF 76

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFR 119
              I T D Q S     + V V+G L    +     F+Q F L P   G Y+VLND+FR
Sbjct: 77  KAEIKTADAQKS-YKEGVTVLVTGCL-TGKDNLRRKFAQSFFLAPQDNG-YFVLNDVFR 132


>Glyma18g50250.1 
          Length = 470

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 8/119 (6%)

Query: 6   LAKAFVEHYYSTFDSNRAALANLYQEGSMLSFEGQ-----KIQGSSNIVAKLTSLPFQQC 60
           +  AFVE YY     +   +   YQ+ S++S          +     I  K+ SL F++ 
Sbjct: 17  VGNAFVEQYYHILHHSPDLVYRFYQDSSVISRPDSSGVMTSVTTMKGINEKILSLNFKEF 76

Query: 61  HHSITTVDCQPSGATSAMLVFVSGNLQLAGEQHALNFSQMFHLMPTQQGSYYVLNDIFR 119
              I T D Q S     + V V+G L    +     F+Q F L P   G Y+VLND+FR
Sbjct: 77  KAEIKTADAQKS-YKEGVTVLVTGCL-TGKDNLRRKFAQSFFLAPQDNG-YFVLNDVFR 132