Miyakogusa Predicted Gene

Lj0g3v0140219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0140219.1 Non Chatacterized Hit- tr|C5Y4B4|C5Y4B4_SORBI
Putative uncharacterized protein Sb05g021440
OS=Sorghu,35.44,3e-18,seg,NULL; coiled-coil,NULL; Transpos_assoc,NULL;
Transposase_24,Transposase, Ptta/En/Spm, plant,CUFF.8567.1
         (822 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g23240.1                                                        74   1e-12
Glyma06g41670.1                                                        66   2e-10
Glyma04g13890.1                                                        62   3e-09
Glyma13g10400.1                                                        61   5e-09
Glyma12g25030.1                                                        61   6e-09
Glyma11g33080.1                                                        60   7e-09
Glyma15g34200.1                                                        59   3e-08
Glyma03g17320.1                                                        59   3e-08
Glyma12g15260.1                                                        58   4e-08
Glyma15g21480.1                                                        57   6e-08
Glyma05g23600.1                                                        57   6e-08
Glyma18g37400.1                                                        57   1e-07
Glyma15g38170.1                                                        57   1e-07
Glyma10g27470.1                                                        54   9e-07

>Glyma01g23240.1 
          Length = 1378

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%)

Query: 1  MDKEWTKHPRFSKEYINGVQSFLDFAYTKGRPQGDEILCPCTKCRNCCWTTRNVVADHLI 60
          MD+ W    R ++EY NGV+ FL FA +  +P   +  CPC KC N    T + +  HLI
Sbjct: 1  MDRSWMNASRITEEYENGVEEFLQFAQSNAQPMWGKYFCPCVKCGNGRRQTVDDIRTHLI 60

Query: 61 AKGFLKGYDVWVHHGEPIRRRFPMEIDDDMED 92
           +G +  Y  W+ HGE +   +  + +D + D
Sbjct: 61 CEGIIHSYTKWIWHGESLDTTYMSQAEDAIAD 92


>Glyma06g41670.1 
          Length = 618

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 1  MDKEWTKHPRFSKEYINGVQSFLDFAYTKGRPQGDEILCPCTKCRNCCWTTRNVVADHLI 60
          MD+ W   PR SK Y +GV+ FL FA           +CPC KC N    + + +  HLI
Sbjct: 1  MDRTWITAPRISKAYQHGVEEFLSFAQINSATIDANFVCPCVKCVNSRCHSLDDIRLHLI 60

Query: 61 AKGFLKGYDVWVHHGEPIRRR-----FPMEID--DDMED 92
            GF   Y  W+ HGE +         P+E++  D MED
Sbjct: 61 CDGFSPTYTKWIWHGELVGHTTTCPPHPVELESGDLMED 99


>Glyma04g13890.1 
          Length = 1235

 Score = 61.6 bits (148), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 1   MDKEWTKHPRFSKEYINGVQSFLDFAYTKGRP-QGDEILCPCTKCRNCCWTTRNVVADHL 59
           MD+ W    R S  Y  GV+ FL  A  + RP +  +  CPC  C N      N + DHL
Sbjct: 1   MDQSWMNESRLSLVYEEGVEQFLQLASERSRPDENGKFFCPCINCLNGRRQKVNDIRDHL 60

Query: 60  IAKGFLKGYDVWVHHGE-------PIRRRFPMEIDDDMED 92
           +     + Y  W+ HGE       P    F +E+ D +ED
Sbjct: 61  LCDEIKRNYTTWIWHGEMADMQSGPQSEPFDVEMRDRLED 100


>Glyma13g10400.1 
          Length = 2049

 Score = 60.8 bits (146), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 8/91 (8%)

Query: 10 RFSKEYINGVQSFLDFAYTKGRPQGD-EILCPCTKCRNCCWTTRNVVADHLIAKGFLKGY 68
          R S EY +G++ FL FA  +GRP  + +  CPC  C N      + + DHL+  G  K Y
Sbjct: 5  RMSPEYEDGIEQFLQFASERGRPNEEGKYYCPCINCLNGRRKLLDDIRDHLLCDGIKKNY 64

Query: 69 DVWVHHGEPIRRR-------FPMEIDDDMED 92
            W+ HGE    +       F +E+ D +ED
Sbjct: 65 TTWIWHGEVTDMQSGSQSEPFDVEMGDQLED 95


>Glyma12g25030.1 
          Length = 1739

 Score = 60.8 bits (146), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 8/91 (8%)

Query: 10 RFSKEYINGVQSFLDFAYTKGRPQGD-EILCPCTKCRNCCWTTRNVVADHLIAKGFLKGY 68
          R S EY +GV+ FL FA  +GRP  + +  CPC  C N      + + DHL+  G  K Y
Sbjct: 5  RMSPEYEDGVEQFLQFASERGRPNEEGKYYCPCINCLNGRRQLLDDIRDHLLCDGIKKNY 64

Query: 69 DVWVHHGEPIRRR-------FPMEIDDDMED 92
            W+ HGE    +       F +E+ D +ED
Sbjct: 65 TTWIWHGEVTDMQSGSQSEPFDVEMGDRLED 95


>Glyma11g33080.1 
          Length = 1508

 Score = 60.5 bits (145), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 37/76 (48%)

Query: 1  MDKEWTKHPRFSKEYINGVQSFLDFAYTKGRPQGDEILCPCTKCRNCCWTTRNVVADHLI 60
          M++ W + PR S EY  GV+ FL FA       G +   PC  C N       V+  HLI
Sbjct: 1  MNRSWIQAPRISDEYEKGVEDFLKFAKQHAPAVGGKYFFPCVNCVNGMRQALFVIRLHLI 60

Query: 61 AKGFLKGYDVWVHHGE 76
             F++ Y  W+ HGE
Sbjct: 61 CDDFIRSYTNWIWHGE 76


>Glyma15g34200.1 
          Length = 1627

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 8/90 (8%)

Query: 11 FSKEYINGVQSFLDFAYTKGRPQGD-EILCPCTKCRNCCWTTRNVVADHLIAKGFLKGYD 69
           S EY +GV+ FL FA  +GRP  + +  CPC  C N      + + DHL+  G  K Y 
Sbjct: 6  MSLEYEDGVEQFLQFASERGRPNEEGKYYCPCINCLNGRRQLLDDIRDHLLYDGIKKNYT 65

Query: 70 VWVHHGEPIRRR-------FPMEIDDDMED 92
           W+ HGE    +       F +E+ D +ED
Sbjct: 66 AWIWHGEVTAMQSGSQSELFDVEMGDRLED 95


>Glyma03g17320.1 
          Length = 232

 Score = 58.5 bits (140), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 14/112 (12%)

Query: 483 EPIGPTGQIVSDLSHFLGTIARNAKFCPLIYTNFKALVKDNEDLIWGYVNDKYIIPEKGR 542
           + IG  G+    L+ FLG IARN +  PL   +++   K+ ++ +   V  K+ IPE+G 
Sbjct: 106 QAIGKEGR---KLASFLGIIARNPELAPLNIDDWRCFDKEEKNKLVDLVRKKFSIPERGV 162

Query: 543 RAVFSRINDAWRRYKCCTKRNYFLKYSSMKERLKNRPTTIPEAHFKQLMTYW 594
             V   +   W+ YKC  +  YF K           P  IP   +  L++YW
Sbjct: 163 EFVKKSLGKKWKDYKCDLRSMYFTK-----------PNHIPRDQWIGLVSYW 203


>Glyma12g15260.1 
          Length = 886

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 1  MDKEWTKHPRFSKEYINGVQSFLDFAYTKGRPQGDEILCPCTKCRNCCWTTRNVVADHLI 60
          MD+ W K  R S+EY N V+ FL FA       G   LCP  KC N        +  HLI
Sbjct: 1  MDQGWMKKLRISEEYDNNVEDFLQFAQQNAPHLGGLYLCPGVKCLNGQRQPLEDIRTHLI 60

Query: 61 AKGFLKGYDVWVHHGE-------PIRRRFPMEIDDDMED 92
            G    Y  W+ HGE       P      +E+ D +ED
Sbjct: 61 CDGISPTYTKWIWHGELPKMSTVPPSHAVDVEVGDHIED 99


>Glyma15g21480.1 
          Length = 1869

 Score = 57.4 bits (137), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 10 RFSKEYINGVQSFLDFAYTKGRPQGD-EILCPCTKCRNCCWTTRNVVADHLIAKGFLKGY 68
          R S EY  GV+ FL FA  +G+P  D +  CPC  C N      + + +HL+  G  + Y
Sbjct: 5  RISPEYEEGVEQFLQFASERGQPDEDGKYYCPCINCLNGRRQILDDIREHLLCDGIKRNY 64

Query: 69 DVWVHHGEPIRRR-------FPMEIDDDMED 92
            W+ HGE    +       F +E+ D +ED
Sbjct: 65 TTWIWHGEMTDMQSGQQSEPFDVEMGDRLED 95


>Glyma05g23600.1 
          Length = 1707

 Score = 57.4 bits (137), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 10 RFSKEYINGVQSFLDFAYTKGRPQGD-EILCPCTKCRNCCWTTRNVVADHLIAKGFLKGY 68
          R S EY  GV+ FL FA  +G+P  D +  CPC  C N      + + +HL+  G  + Y
Sbjct: 5  RISPEYEEGVEQFLQFASERGQPDEDGKYYCPCINCLNGRRQILDDIREHLLCDGIKRNY 64

Query: 69 DVWVHHGEPIRRR-------FPMEIDDDMED 92
            W+ HGE    +       F +E+ D +ED
Sbjct: 65 TTWIWHGEMTDMQSGQQSEPFDVEMGDRLED 95


>Glyma18g37400.1 
          Length = 965

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 12 SKEYINGVQSFLDFAYTKGRPQGD-EILCPCTKCRNCCWTTRNVVADHLIAKGFLKGYDV 70
          S EY +GV  FL FA  +GRP  + +  CPC  C N      + + DHL+  G  K Y  
Sbjct: 2  SPEYEDGVAQFLQFALERGRPNEEGKYYCPCINCLNGRRQLLDDIRDHLLCDGMKKNYTT 61

Query: 71 WVHHGEPIRRR-------FPMEIDDDMED 92
          W+ HGE    +       F +E+ D +ED
Sbjct: 62 WIWHGEVTDMQSGSQSESFDVEMGDRLED 90


>Glyma15g38170.1 
          Length = 886

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 10 RFSKEYINGVQSFLDFAYTKGRPQGD-EILCPCTKCRNCCWTTRNVVADHLIAKGFLKGY 68
          R S EY  GV+ FL FA  +G+P  D +  CPC  C N      + + +HL+  G  + Y
Sbjct: 5  RISLEYEEGVEQFLQFASQRGQPDEDGKYYCPCINCLNGRRQILDDIREHLLCDGIKRNY 64

Query: 69 DVWVHHGEPIRRR-------FPMEIDDDMED 92
            W+ HGE    +       F +E+ D +ED
Sbjct: 65 TTWIWHGEMTDMQSGQQSEPFDVEMGDHLED 95


>Glyma10g27470.1 
          Length = 1574

 Score = 53.5 bits (127), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 8/91 (8%)

Query: 10 RFSKEYINGVQSFLDFAYTKGRPQGD-EILCPCTKCRNCCWTTRNVVADHLIAKGFLKGY 68
          R S +Y +GV+ FL F+  +GRP  + +  CPC    N      + + DHL+  G  K Y
Sbjct: 5  RMSPDYEDGVEQFLQFSSERGRPNEEGKYYCPCINYLNGRRQLLDDIRDHLLCDGIKKNY 64

Query: 69 DVWVHHGEPIRRR-------FPMEIDDDMED 92
            W+ HGE    +       F +E+ D +ED
Sbjct: 65 TTWIWHGEVTDMQSGSQSEPFDVEMGDRLED 95