Miyakogusa Predicted Gene

Lj0g3v0139839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0139839.1 tr|G7J4S2|G7J4S2_MEDTR GRAM domain-containing
protein 1B OS=Medicago truncatula GN=MTR_3g077000
PE=4,89.58,4e-18,C2,C2 calcium-dependent membrane targeting; no
description,NULL; OS08G0492400 PROTEIN,NULL; MCTP-REL,CUFF.8519.1
         (48 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g18750.1                                                        97   3e-21
Glyma04g36180.1                                                        91   4e-19
Glyma09g01830.1                                                        82   9e-17
Glyma15g12790.1                                                        79   1e-15
Glyma07g39920.1                                                        76   8e-15
Glyma17g00850.1                                                        73   8e-14

>Glyma06g18750.1 
          Length = 1017

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/48 (91%), Positives = 46/48 (95%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           +ES GLSDPYVV TCNGQTRSSSVKLQTSDPQWNE+LEFDAMEEPPSV
Sbjct: 546 LESEGLSDPYVVFTCNGQTRSSSVKLQTSDPQWNEILEFDAMEEPPSV 593


>Glyma04g36180.1 
          Length = 1014

 Score = 90.5 bits (223), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 43/48 (89%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           +ES GLSDPYVV TCNGQTRSSSVKLQ  DP WNE+LEFDAMEEPPSV
Sbjct: 543 LESEGLSDPYVVFTCNGQTRSSSVKLQMPDPLWNEILEFDAMEEPPSV 590


>Glyma09g01830.1 
          Length = 1034

 Score = 82.4 bits (202), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 33/48 (68%), Positives = 43/48 (89%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           ++S+GLSDPYVV TCNG+TR+SS+K Q S+P WNE+ EFDAM++PPSV
Sbjct: 553 VDSSGLSDPYVVFTCNGKTRTSSIKFQKSNPTWNEIFEFDAMDDPPSV 600


>Glyma15g12790.1 
          Length = 1459

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 42/48 (87%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           ++S+GLSDPYVV TCNG+TR+SS+K Q S+  WNE+ EFDAM++PPSV
Sbjct: 631 VDSSGLSDPYVVFTCNGKTRTSSIKFQKSNLTWNEIFEFDAMDDPPSV 678


>Glyma07g39920.1 
          Length = 1003

 Score = 76.3 bits (186), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 39/48 (81%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           ++S    DPYVV TCNG+TR+SS+K + SDP WNE+ EFDAM++PPSV
Sbjct: 539 VDSGAFCDPYVVFTCNGKTRTSSIKFKKSDPLWNEIFEFDAMDDPPSV 586


>Glyma17g00850.1 
          Length = 1061

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 39/48 (81%)

Query: 1   MESTGLSDPYVVLTCNGQTRSSSVKLQTSDPQWNEVLEFDAMEEPPSV 48
           ++S+   DPYVV +CNG+TR+SS+K + SD  WNE+ EFDAM++PPSV
Sbjct: 603 VDSSAFCDPYVVFSCNGKTRTSSIKFKKSDALWNEIFEFDAMDDPPSV 650