Miyakogusa Predicted Gene

Lj0g3v0139089.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0139089.3 tr|G7JLW2|G7JLW2_MEDTR mRNA-capping enzyme
OS=Medicago truncatula GN=MTR_4g014920 PE=4 SV=1,82.14,0.00003,
,CUFF.8457.3
         (89 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g27240.1                                                        52   1e-07
Glyma03g14700.1                                                        52   1e-07
Glyma03g14700.2                                                        52   1e-07
Glyma03g14700.3                                                        52   2e-07
Glyma01g27240.2                                                        52   2e-07

>Glyma01g27240.1 
          Length = 676

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 17  FWLLSTVTKLLKEFIKRLSHETNGLYFR 44
           FWLLSTVTKLLKEFIKRLSHE +GL F+
Sbjct: 501 FWLLSTVTKLLKEFIKRLSHEADGLIFQ 528


>Glyma03g14700.1 
          Length = 683

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 17  FWLLSTVTKLLKEFIKRLSHETNGLYFR 44
           FWLLSTVTKLLKEFIKRLSHE +GL F+
Sbjct: 508 FWLLSTVTKLLKEFIKRLSHEADGLIFQ 535


>Glyma03g14700.2 
          Length = 637

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 17  FWLLSTVTKLLKEFIKRLSHETNGLYFR 44
           FWLLSTVTKLLKEFIKRLSHE +GL F+
Sbjct: 462 FWLLSTVTKLLKEFIKRLSHEADGLIFQ 489


>Glyma03g14700.3 
          Length = 637

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 17  FWLLSTVTKLLKEFIKRLSHETNGLYFR 44
           FWLLSTVTKLLKEFIKRLSHE +GL F+
Sbjct: 508 FWLLSTVTKLLKEFIKRLSHEADGLIFQ 535


>Glyma01g27240.2 
          Length = 186

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 26/28 (92%)

Query: 17 FWLLSTVTKLLKEFIKRLSHETNGLYFR 44
          FWLLSTVTKLLKEFIKRLSHE +GL F+
Sbjct: 11 FWLLSTVTKLLKEFIKRLSHEADGLIFQ 38