Miyakogusa Predicted Gene

Lj0g3v0138819.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0138819.1 Non Chatacterized Hit- tr|I3T5G8|I3T5G8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,82.14,9e-19,SYNTAXIN, ARABIDOPSIS THALIANA,NULL; SYNTAXIN,NULL;
coiled-coil,NULL; no description,NULL,CUFF.8435.1
         (105 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27050.1                                                       100   4e-22
Glyma02g08040.1                                                        84   5e-17
Glyma13g38370.1                                                        67   3e-12
Glyma13g38370.2                                                        67   3e-12
Glyma12g32100.2                                                        67   5e-12
Glyma12g32100.3                                                        67   5e-12
Glyma12g32100.1                                                        67   5e-12
Glyma08g06290.1                                                        54   3e-08
Glyma15g07360.1                                                        53   7e-08
Glyma13g31960.1                                                        53   8e-08

>Glyma16g27050.1 
          Length = 308

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 52/56 (92%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTATTMSVMIQL 56
           M KDVDEVKKTAH++KTK+EELDKENLANRQKPGCGKGS VDRSRTATT+S+  +L
Sbjct: 84  MEKDVDEVKKTAHYLKTKIEELDKENLANRQKPGCGKGSGVDRSRTATTISLKKKL 139


>Glyma02g08040.1 
          Length = 132

 Score = 83.6 bits (205), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/56 (73%), Positives = 47/56 (83%), Gaps = 4/56 (7%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTATTMSVMIQL 56
           M KDVDEVKKTAH++KTK+EELDKENLAN    GCGKGS  DRSRTATT+S+  +L
Sbjct: 64  MEKDVDEVKKTAHYLKTKIEELDKENLAN----GCGKGSGADRSRTATTISLKKKL 115


>Glyma13g38370.1 
          Length = 306

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 38/49 (77%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTATT 49
           M KD+DEV K AH +KTK+E + ++NL+NRQKPGC KG+ VDR+R   T
Sbjct: 85  MEKDIDEVGKIAHGVKTKIEAISRDNLSNRQKPGCEKGTGVDRARMNMT 133


>Glyma13g38370.2 
          Length = 305

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 38/49 (77%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTATT 49
           M KD+DEV K AH +KTK+E + ++NL+NRQKPGC KG+ VDR+R   T
Sbjct: 85  MEKDIDEVGKIAHGVKTKIEAISRDNLSNRQKPGCEKGTGVDRARMNMT 133


>Glyma12g32100.2 
          Length = 284

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 38/49 (77%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTATT 49
           M KD+DEV K AH +KTK+E + ++NL+NRQKPGC KG+ +DR+R   T
Sbjct: 85  MEKDIDEVGKIAHGVKTKIEAISRDNLSNRQKPGCEKGTGIDRARMNMT 133


>Glyma12g32100.3 
          Length = 306

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 38/49 (77%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTATT 49
           M KD+DEV K AH +KTK+E + ++NL+NRQKPGC KG+ +DR+R   T
Sbjct: 85  MEKDIDEVGKIAHGVKTKIEAISRDNLSNRQKPGCEKGTGIDRARMNMT 133


>Glyma12g32100.1 
          Length = 306

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 38/49 (77%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTATT 49
           M KD+DEV K AH +KTK+E + ++NL+NRQKPGC KG+ +DR+R   T
Sbjct: 85  MEKDIDEVGKIAHGVKTKIEAISRDNLSNRQKPGCEKGTGIDRARMNMT 133


>Glyma08g06290.1 
          Length = 302

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 33/47 (70%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTA 47
           M KDV++V K    IK K+E L++ N ANR  PGCG GS+ DR+RT+
Sbjct: 80  MDKDVEQVLKRVKVIKGKLEALERSNAANRNIPGCGPGSSADRTRTS 126


>Glyma15g07360.1 
          Length = 304

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 32/47 (68%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTA 47
           M +DV +V K    IK K+E L++ N ANR  PGCG GS+ DR+RT+
Sbjct: 80  MDQDVQQVLKRVKLIKGKLESLERSNAANRNIPGCGPGSSADRTRTS 126


>Glyma13g31960.1 
          Length = 304

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 32/47 (68%)

Query: 1   MGKDVDEVKKTAHFIKTKVEELDKENLANRQKPGCGKGSAVDRSRTA 47
           M +DV +V K    IK K+E L++ N ANR  PGCG GS+ DR+RT+
Sbjct: 80  MDQDVQQVLKRVKLIKGKLESLERSNAANRNIPGCGPGSSADRTRTS 126