Miyakogusa Predicted Gene

Lj0g3v0136139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0136139.1 Non Chatacterized Hit- tr|I1LA23|I1LA23_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55486 PE,47.06,0.000003,
,CUFF.8341.1
         (75 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g15160.3                                                        56   1e-08
Glyma10g15160.2                                                        56   1e-08
Glyma10g15160.1                                                        55   1e-08

>Glyma10g15160.3 
          Length = 150

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 1  MESCVASSPRLLPVTGKIQSQVHVKGTGPNIVGMPHLPFNIRKEELRTSTFKSSSR---- 56
          M SCV +SP  LPV        HVK T PNIVGM  LP+NIRK EL+ +T ++ S     
Sbjct: 1  MASCVGTSPLYLPVGIGNFPHAHVKLTRPNIVGMKPLPYNIRKGELKIATLQNPSSHVRH 60

Query: 57 --GINAKC 62
             +N KC
Sbjct: 61 AAALNFKC 68


>Glyma10g15160.2 
          Length = 150

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 6/68 (8%)

Query: 1  MESCVASSPRLLPVTGKIQSQVHVKGTGPNIVGMPHLPFNIRKEELRTSTFKSSSR---- 56
          M SCV +SP  LPV        HVK T PNIVGM  LP+NIRK EL+ +T ++ S     
Sbjct: 1  MASCVGTSPLYLPVGIGNFPHAHVKLTRPNIVGMKPLPYNIRKGELKIATLQNPSSHVRH 60

Query: 57 --GINAKC 62
             +N KC
Sbjct: 61 AAALNFKC 68


>Glyma10g15160.1 
          Length = 164

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 40/73 (54%)

Query: 1  MESCVASSPRLLPVTGKIQSQVHVKGTGPNIVGMPHLPFNIRKEELRTSTFKSSSRGINA 60
          M SCV +SP  LPV        HVK T PNIVGM  LP+NIRK EL+ +T ++ S  +  
Sbjct: 1  MASCVGTSPLYLPVGIGNFPHAHVKLTRPNIVGMKPLPYNIRKGELKIATLQNPSSHVRH 60

Query: 61 KCAASASATQVLK 73
            A      + +K
Sbjct: 61 AAALPGIGLEDVK 73