Miyakogusa Predicted Gene
- Lj0g3v0133569.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0133569.1 Non Chatacterized Hit- tr|F4IH20|F4IH20_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,44.55,2e-18,seg,NULL,CUFF.8179.1
(182 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g02750.1 284 4e-77
Glyma11g35650.1 119 2e-27
>Glyma18g02750.1
Length = 282
Score = 284 bits (726), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 129/154 (83%), Positives = 141/154 (91%)
Query: 29 CEFSFLDGNKLYNYTLSSPIRNFPHGVLSEDGFYKVAVNQTTLWFQLCDGMVFNHDPPTC 88
C+FSFLDGN LYNYTLSSPIRNFPHG+LSEDGFYKVAVN TTLWFQLCDGM+FNHDPP C
Sbjct: 32 CQFSFLDGNTLYNYTLSSPIRNFPHGILSEDGFYKVAVNDTTLWFQLCDGMIFNHDPPIC 91
Query: 89 ADCWDCGGPTRCGMECNALLANNIGGYHVCTAIGLGSKIDVEVIDKKNPHIGVIVKMSSS 148
ADCWDCGGP CGM+CNAL+ANN+GGYHVCTAIG G KIDV++IDKKNPH GVIVKMS+S
Sbjct: 92 ADCWDCGGPKHCGMKCNALVANNVGGYHVCTAIGRGPKIDVDIIDKKNPHTGVIVKMSNS 151
Query: 149 SPKYNCSLAVSVLCNVNRVQAPHTLEKLGACNYV 182
PKYNCSLAVSVLCN+N VQ P LE+LGAC+YV
Sbjct: 152 GPKYNCSLAVSVLCNLNGVQGPQALERLGACDYV 185
>Glyma11g35650.1
Length = 178
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 62/69 (89%)
Query: 114 GYHVCTAIGLGSKIDVEVIDKKNPHIGVIVKMSSSSPKYNCSLAVSVLCNVNRVQAPHTL 173
GYHVCTAIG G KIDV++IDKKNPH GVIVKMS+S PKYNCSLAVSVLCN+N VQ P TL
Sbjct: 13 GYHVCTAIGRGQKIDVDIIDKKNPHTGVIVKMSNSGPKYNCSLAVSVLCNLNGVQGPRTL 72
Query: 174 EKLGACNYV 182
E+LGAC+YV
Sbjct: 73 ERLGACDYV 81