Miyakogusa Predicted Gene

Lj0g3v0133569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0133569.1 Non Chatacterized Hit- tr|F4IH20|F4IH20_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,44.55,2e-18,seg,NULL,CUFF.8179.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02750.1                                                       284   4e-77
Glyma11g35650.1                                                       119   2e-27

>Glyma18g02750.1 
          Length = 282

 Score =  284 bits (726), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 129/154 (83%), Positives = 141/154 (91%)

Query: 29  CEFSFLDGNKLYNYTLSSPIRNFPHGVLSEDGFYKVAVNQTTLWFQLCDGMVFNHDPPTC 88
           C+FSFLDGN LYNYTLSSPIRNFPHG+LSEDGFYKVAVN TTLWFQLCDGM+FNHDPP C
Sbjct: 32  CQFSFLDGNTLYNYTLSSPIRNFPHGILSEDGFYKVAVNDTTLWFQLCDGMIFNHDPPIC 91

Query: 89  ADCWDCGGPTRCGMECNALLANNIGGYHVCTAIGLGSKIDVEVIDKKNPHIGVIVKMSSS 148
           ADCWDCGGP  CGM+CNAL+ANN+GGYHVCTAIG G KIDV++IDKKNPH GVIVKMS+S
Sbjct: 92  ADCWDCGGPKHCGMKCNALVANNVGGYHVCTAIGRGPKIDVDIIDKKNPHTGVIVKMSNS 151

Query: 149 SPKYNCSLAVSVLCNVNRVQAPHTLEKLGACNYV 182
            PKYNCSLAVSVLCN+N VQ P  LE+LGAC+YV
Sbjct: 152 GPKYNCSLAVSVLCNLNGVQGPQALERLGACDYV 185


>Glyma11g35650.1 
          Length = 178

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 62/69 (89%)

Query: 114 GYHVCTAIGLGSKIDVEVIDKKNPHIGVIVKMSSSSPKYNCSLAVSVLCNVNRVQAPHTL 173
           GYHVCTAIG G KIDV++IDKKNPH GVIVKMS+S PKYNCSLAVSVLCN+N VQ P TL
Sbjct: 13  GYHVCTAIGRGQKIDVDIIDKKNPHTGVIVKMSNSGPKYNCSLAVSVLCNLNGVQGPRTL 72

Query: 174 EKLGACNYV 182
           E+LGAC+YV
Sbjct: 73  ERLGACDYV 81