Miyakogusa Predicted Gene
- Lj0g3v0132309.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0132309.1 tr|Q108W5|Q108W5_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=LOC_Os10g42196 PE=4 SV=1,39.42,3e-19,
,CUFF.8053.1
(196 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g23090.1 226 9e-60
Glyma06g33590.1 223 7e-59
Glyma10g37140.1 164 4e-41
Glyma10g37140.2 164 4e-41
Glyma10g37130.1 160 8e-40
Glyma20g30510.1 137 5e-33
Glyma04g39280.1 120 7e-28
Glyma12g01750.2 100 8e-22
Glyma11g01070.2 90 1e-18
Glyma11g01070.1 76 2e-14
Glyma11g04670.1 74 1e-13
Glyma12g01750.1 64 9e-11
Glyma11g11720.1 57 1e-08
Glyma04g32480.1 56 3e-08
Glyma01g40630.1 55 5e-08
Glyma06g22040.1 54 1e-07
Glyma01g44460.1 53 2e-07
>Glyma09g23090.1
Length = 302
Score = 226 bits (577), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 142/194 (73%), Gaps = 3/194 (1%)
Query: 1 MLSDCHSVSNHAQSQSINNYEEEEKLKEDCQSVPIVEDNSSEGF-VTVHDPYPIVDPTWR 59
+LSD HS+S+H SQ INN E+E K +++ Q P E N+SE TV PYPI DP WR
Sbjct: 111 LLSDNHSLSHHGLSQCINNAEKENKFEKEFQPDPKDEANTSESLNATV--PYPIADPVWR 168
Query: 60 GSWCFSNQSSDTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAVWPKGFSESGPN 119
GS S+ S T GL AH+STLA PKVLEETR FP+VL +L PR+AVWPK F + GPN
Sbjct: 169 GSLRISDPSFGTVIGLLAHVSTLASPKVLEETRFFPDVLCPDLRPRTAVWPKSFMKCGPN 228
Query: 120 DESIALYFFPESESVERAYDNLVDDMISHDLGIKAMIKNAELLVFPSTVLPIKHRRFQAK 179
+SIALYFFP+SE VERA+ LV+DM+ DL ++ ++NAELL+FPS +LPI+ RRFQ K
Sbjct: 229 MDSIALYFFPDSERVERAFHKLVEDMMYFDLSLRTEVENAELLIFPSILLPIQCRRFQEK 288
Query: 180 YYLWGVFRAKQAVL 193
YYLWGVFRAK+ L
Sbjct: 289 YYLWGVFRAKKPSL 302
>Glyma06g33590.1
Length = 302
Score = 223 bits (569), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 141/194 (72%), Gaps = 3/194 (1%)
Query: 1 MLSDCHSVSNHAQSQSINNYEEEEKLKEDCQSVPIVEDNSSEGF-VTVHDPYPIVDPTWR 59
+LSD HS+S+H SQ INN E+E K +++ Q P E N+SE TV PYPI DP WR
Sbjct: 111 LLSDNHSLSHHGLSQCINNAEKENKFEKEFQPDPKDEANTSESLNATV--PYPIADPVWR 168
Query: 60 GSWCFSNQSSDTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAVWPKGFSESGPN 119
GS S+ S T GL AH+STLA PKVLEETR FP+VL +L PR+AVWPK F + GPN
Sbjct: 169 GSLRISDPSFGTVIGLLAHVSTLASPKVLEETRFFPDVLCPDLRPRTAVWPKSFMKCGPN 228
Query: 120 DESIALYFFPESESVERAYDNLVDDMISHDLGIKAMIKNAELLVFPSTVLPIKHRRFQAK 179
+SIALYFFP+SE VERA+ LV+DM+ DL ++ ++NAELL+FPS +LPI+ RRF K
Sbjct: 229 MDSIALYFFPDSERVERAFHKLVEDMMYFDLSLRTEVENAELLIFPSILLPIQCRRFLEK 288
Query: 180 YYLWGVFRAKQAVL 193
YYLWGVFRAK+ L
Sbjct: 289 YYLWGVFRAKKPSL 302
>Glyma10g37140.1
Length = 338
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 122/223 (54%), Gaps = 34/223 (15%)
Query: 1 MLSDCHSVSNHAQSQSINNYEEEEKLKEDC-----------------------------Q 31
+LS HS S N EEE ++K DC +
Sbjct: 109 VLSASHSSSEPEHPHCSNRGEEEHEVKNDCGPVPRDVANFDVGEEESVARDLANSDVSFK 168
Query: 32 SVPIVED--NSSEGFVTVHD---PYPIVDPTWRGSWCFSNQSSDTFTGLFAHLSTLACPK 86
SVP+ + NS G V V P +DP WRGS F N + T +GL AH+S LAC +
Sbjct: 169 SVPVSQGATNSDSGCVEVDGHVYAQPTIDPIWRGSMYFCNGTIRTVSGLLAHISNLACSQ 228
Query: 87 VLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFPESESVERAYDNLVDDMI 146
V EET FPEVL A LPR VW + F P D+ IAL+FFP+SE E+ +D LV+D++
Sbjct: 229 VAEETGHFPEVLHAEFLPRDKVWAESFKRGDPTDQDIALFFFPDSEGSEKDFDVLVEDIM 288
Query: 147 SHDLGIKAMIKNAELLVFPSTVLPIKHRRFQAKYYLWGVFRAK 189
I+ + KNAELL+FPST LP+++ R++AKYYLWGVFR K
Sbjct: 289 ICKHVIRFVGKNAELLIFPSTELPVQNWRYEAKYYLWGVFRKK 331
>Glyma10g37140.2
Length = 309
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 122/223 (54%), Gaps = 34/223 (15%)
Query: 1 MLSDCHSVSNHAQSQSINNYEEEEKLKEDC-----------------------------Q 31
+LS HS S N EEE ++K DC +
Sbjct: 80 VLSASHSSSEPEHPHCSNRGEEEHEVKNDCGPVPRDVANFDVGEEESVARDLANSDVSFK 139
Query: 32 SVPIVED--NSSEGFVTVHD---PYPIVDPTWRGSWCFSNQSSDTFTGLFAHLSTLACPK 86
SVP+ + NS G V V P +DP WRGS F N + T +GL AH+S LAC +
Sbjct: 140 SVPVSQGATNSDSGCVEVDGHVYAQPTIDPIWRGSMYFCNGTIRTVSGLLAHISNLACSQ 199
Query: 87 VLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFPESESVERAYDNLVDDMI 146
V EET FPEVL A LPR VW + F P D+ IAL+FFP+SE E+ +D LV+D++
Sbjct: 200 VAEETGHFPEVLHAEFLPRDKVWAESFKRGDPTDQDIALFFFPDSEGSEKDFDVLVEDIM 259
Query: 147 SHDLGIKAMIKNAELLVFPSTVLPIKHRRFQAKYYLWGVFRAK 189
I+ + KNAELL+FPST LP+++ R++AKYYLWGVFR K
Sbjct: 260 ICKHVIRFVGKNAELLIFPSTELPVQNWRYEAKYYLWGVFRKK 302
>Glyma10g37130.1
Length = 374
Score = 160 bits (405), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 124/219 (56%), Gaps = 32/219 (14%)
Query: 1 MLSDCHSVSNHAQSQSINNYEEEEKLKEDCQSVPI-----------VEDNSS-----EGF 44
+LS CH +S + +N EE ++K++C P DN S +G
Sbjct: 149 VLSGCH-ISPEPEHPQCSNRGEECEMKDECGPAPRDVANFDVVSQGATDNDSGCVELDGH 207
Query: 45 VTVHDPYPIVDPTWR------------GSWCFSNQSSDTFTGLFAHLSTLACPKVLEETR 92
V H P +DP WR GS F N+++ T G+ AH+S LAC KV EET
Sbjct: 208 VYAH---PTIDPIWRYINCFANFIGNWGSMYFCNETNGTVNGVLAHMSNLACSKVAEETG 264
Query: 93 LFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFPESESVERAYDNLVDDMISHDLGI 152
FPEVL A LLPR VWP+ F P D+ IAL+ FP++E E+ +D LV+D++ ++ I
Sbjct: 265 HFPEVLHAELLPRDKVWPESFKSRRPTDQDIALFIFPDTEGSEKDFDKLVEDIMINEHVI 324
Query: 153 KAMIKNAELLVFPSTVLPIKHRRFQAKYYLWGVFRAKQA 191
+ + K AELL+F S LPI++ RF+AKYYLWGVFR KQ
Sbjct: 325 RIVAKKAELLIFHSIELPIQYWRFEAKYYLWGVFRRKQT 363
>Glyma20g30510.1
Length = 318
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 98/152 (64%), Gaps = 7/152 (4%)
Query: 28 EDCQSVPIVE--DNSSEGFVTVHDPY----PIVDPTWRGSWCFSNQSSDTFTGLFAHLST 81
E +SVP+ + +NS G V + D Y P ++P WRGS F N+++ T GL AH+S
Sbjct: 166 EGFKSVPVSQGANNSDSGCVEL-DGYVYAQPTINPIWRGSMYFCNETNGTVNGLLAHMSD 224
Query: 82 LACPKVLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFPESESVERAYDNL 141
LAC KV+EET FPEVL A LLPR VWP+ F P D+ IAL+ FP+ E E+ +D +
Sbjct: 225 LACSKVVEETGHFPEVLHAELLPRDKVWPESFKSRRPTDQDIALFIFPDGEGSEKDFDKV 284
Query: 142 VDDMISHDLGIKAMIKNAELLVFPSTVLPIKH 173
V+D++ H+ IK + K AELL+F S LPIK+
Sbjct: 285 VEDIMIHEHAIKIVAKKAELLIFHSIELPIKY 316
>Glyma04g39280.1
Length = 265
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Query: 51 YPIVDPTWRGSWCFSNQSSDTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAVWP 110
+P+ DP W G + N+++D GL A+ S+ AC KVL + P +L +L R A+WP
Sbjct: 121 HPLSDPVWTGQFIL-NKATDF--GLVAYASSKACSKVLSAVTVLPTLLDVEILSRFAIWP 177
Query: 111 KGFSESGPNDESIALYFFPESESVERAYDNLVDDMISHDLGIKAMIKNAELLVFPSTVLP 170
K F PN ++I LYFFP E E ++D +++D+I + +KA+I N ELL+F S +LP
Sbjct: 178 KSFDMFPPNSDNIGLYFFPLYERDELSFDRVLNDIIEQEFALKAVINNVELLIFSSHLLP 237
Query: 171 IKHRRFQAKYYLWGVFRAK 189
RR KYYLWG F+ K
Sbjct: 238 PNDRRICEKYYLWGAFKPK 256
>Glyma12g01750.2
Length = 1195
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 70 DTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFP 129
D +TG+ AHLS A PKV E + F +S N + R +VWP F + G +++IALYFF
Sbjct: 641 DLYTGIQAHLSACASPKVHEVVKKFLPEVSLNEVSRLSVWPSQFHQGGAKEDNIALYFFA 700
Query: 130 ES-ESVERAYDNLVDDMISHDLGIKAMIKNAELLVFPSTVLPIKHRRFQAKYYLWGVFRA 188
ES ER Y L+D MI +DL ++ ELL+F S L +R+ ++LWG+FR
Sbjct: 701 RDIESYERYYKGLLDHMIRNDLALRGTFDGVELLIFASNQLLEDSQRWNMLFFLWGIFRG 760
Query: 189 KQ 190
++
Sbjct: 761 RR 762
>Glyma11g01070.2
Length = 1450
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 51 YPIVDPTWRGSWCFSNQSS--DTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAV 108
+P + TW+G + D +TGL AHLS+ A PKVL F +S + + R ++
Sbjct: 765 FPEYEYTWQGVFEVHRNGKPPDIYTGLQAHLSSCASPKVLGVVNKFLPKVSLSEISRLSM 824
Query: 109 WPKGFSESGPNDESIALYFFPESESV------ERAYDNLVDDMISHDLGIKAMIKNAELL 162
WP F G D + L E + + ER Y L+D MI +DL +K ELL
Sbjct: 825 WPSQFHHGGQMDIILILTVDHEMQKIHFSLFYERHYKGLLDHMIRNDLALKGDFDGVELL 884
Query: 163 VFPSTVLPIKHRRFQAKYYLWGVFRAKQ 190
+FPS LP +R+ ++LWGVFR ++
Sbjct: 885 IFPSNQLPENSQRWNMLFFLWGVFRGRR 912
>Glyma11g01070.1
Length = 1450
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 32/164 (19%)
Query: 34 PIVEDNSSEGFVTVHDP-----YPIVDPTWRGSWCFSNQSS--DTFTGLFAHLSTLACPK 86
P+V D S++ P +P + TW+G + D +TGL AHLS+ A PK
Sbjct: 774 PVVRDLSNKALTMSSVPLKMLAFPEYEYTWQGVFEVHRNGKPPDIYTGLQAHLSSCASPK 833
Query: 87 VLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFPESESVERAYDNLVDDMI 146
VL F +S + + R +++ ER Y L+D MI
Sbjct: 834 VLGVVNKFLPKVSLSEISRLSIY-------------------------ERHYKGLLDHMI 868
Query: 147 SHDLGIKAMIKNAELLVFPSTVLPIKHRRFQAKYYLWGVFRAKQ 190
+DL +K ELL+FPS LP +R+ ++LWGVFR ++
Sbjct: 869 RNDLALKGDFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGRR 912
>Glyma11g04670.1
Length = 130
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 55 DPTWRGSWCFSNQS--SDTFTGLFAHLSTLACPKVLE-ETRLFPEVLSANLLPRSAVWPK 111
D + RG + N + T+ G+ AHLS A +VLE RL ++ LPR WP
Sbjct: 1 DYSCRGKFQIHNSEGIARTWDGIQAHLSNCASVEVLEVANRLSEIIIILEELPRLRTWPS 60
Query: 112 GFSESGPNDESIALYFFPESESVERAYDNLVDDMISHDLGIKAMIKNAELLVFPSTVLP 170
F S + IALYFF Y+ LV+ M+++DL +K + ELL+FPS +LP
Sbjct: 61 QFMRSQVTENDIALYFFAHDSDSYIYYEQLVNYMMNNDLALKGNLDGVELLIFPSNILP 119
>Glyma12g01750.1
Length = 1381
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 70 DTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFP 129
D +TG+ AHLS A PKV E + F +S N + R +VWP F + G +++IALYFF
Sbjct: 847 DLYTGIQAHLSACASPKVHEVVKKFLPEVSLNEVSRLSVWPSQFHQGGAKEDNIALYFFA 906
Query: 130 ES-ESVERAYDNLVDDMISH------DLGIKAMIKNAELLVFPSTVLPIKH--------- 173
E E Y + ++ + D G ++ ++ ++++P LP H
Sbjct: 907 RDIERQEYEYHSSIETICGDFSVFIPDAGCWHLLVDS-VMLWPVNFLPFGHWWSVLAAQF 965
Query: 174 ---RRFQAKYYLWGVFRAKQ 190
+ ++LWG+FR ++
Sbjct: 966 GLLDSWNMLFFLWGIFRGRR 985
>Glyma11g11720.1
Length = 1445
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 70 DTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFP 129
D +TG+ AHLS A PKV E + F +S N + R ++WP F + G +++IALYFF
Sbjct: 846 DLYTGIQAHLSACASPKVHEVVKKFLPEVSLNEVSRLSIWPSQFHQGGAKEDNIALYFF- 904
Query: 130 ESESVER 136
++ +ER
Sbjct: 905 -AKDIER 910
>Glyma04g32480.1
Length = 218
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 68 SSDTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYF 127
SS+ + GL A + K + + P VL LP F ++ P + IALYF
Sbjct: 43 SSEFYDGLEAQPPCIVNKKAYKFSTEMPSVLQLESLPVLNALTDIFQDNSPRLQDIALYF 102
Query: 128 FPESESVERAYDNLVDDMISHDLGIKAMIKN----AELLVFPSTVLPIKHRRFQAKYYLW 183
FP SE ER+ NL D ++ K+M+++ ELLVF S L + + A ++LW
Sbjct: 103 FP-SELTERSRKNL-DSILKFLNAEKSMLRSYINGVELLVFTSNQLDMDS-KVNAGHFLW 159
Query: 184 GVFRAKQ 190
G+FR K+
Sbjct: 160 GMFRQKK 166
>Glyma01g40630.1
Length = 229
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 71 TFTGLFAHLSTLACPKVLE--ETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFF 128
T+ + AHLS A +VLE T E++ LPR WP F S +++IA YFF
Sbjct: 14 TWDAIQAHLSNRASAEVLEVANTNRLSEIIILEELPRLRTWPSQFMRSQVTEDNIAQYFF 73
Query: 129 PESESVERAYDNLVDDMISHDLGIKAMIKNAELLVFPSTVLPIKHRRFQAKYY 181
Y+ LV+ M+++DL +K + + F V RR + +
Sbjct: 74 AHDSDSYIYYEQLVNYMMNNDLALKGHLDGDGMACFSFGVYSEDKRRITQQVH 126
>Glyma06g22040.1
Length = 244
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 68 SSDTFTGLFAHLSTLACPKVLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYF 127
SS+ + GL A + K + + P VL LP F ++ P + IALYF
Sbjct: 109 SSEFYDGLEAQPPCIVNKKAYKFSTEMPPVLQLESLPVLNALTDIFQDNSPRLQDIALYF 168
Query: 128 FPESESVERAYDNL---VDDMISHDLGIKAMIKNAELLVFPSTVLPIKHR----RFQAKY 180
FP SE ER+ NL + M + +++ I ELLVF S L + + + ++
Sbjct: 169 FP-SELTERSRKNLDSILKFMNAEKSMLRSYINGVELLVFTSNQLDMDSKGAIAAVKTRH 227
Query: 181 YLWGVFRAKQ 190
+LWG+FR K+
Sbjct: 228 FLWGLFRQKK 237
>Glyma01g44460.1
Length = 1418
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 32/144 (22%)
Query: 34 PIVEDNSSEGFVTVHDP-----YPIVDPTWRGSWCF--SNQSSDTFTGLFAHLSTLACPK 86
P+V D S + P +P + TW+G + + + D +TG AHLS+ A PK
Sbjct: 777 PVVRDLSDKAVTMSSVPLKMLAFPEYEYTWQGVFEVHRNGKPPDLYTGFQAHLSSCASPK 836
Query: 87 VLEETRLFPEVLSANLLPRSAVWPKGFSESGPNDESIALYFFPESESVERAYDNLVDDMI 146
VL F +S + + R +++ ER Y L+D MI
Sbjct: 837 VLGVVNKFLPKVSLSEVSRLSIY-------------------------ERHYKGLLDHMI 871
Query: 147 SHDLGIKAMIKNAELLVFPSTVLP 170
+DL +K +LL+FPS LP
Sbjct: 872 RNDLALKGNFDGVQLLIFPSNQLP 895