Miyakogusa Predicted Gene

Lj0g3v0132019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0132019.1 Non Chatacterized Hit- tr|G7KL59|G7KL59_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,41.81,2e-17,CDT1,CDT1 Geminin-binding domain-like; "Winged
helix" DNA-binding domain,NULL; seg,NULL; DNA replica,CUFF.8035.1
         (540 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g29120.1                                                       556   e-158
Glyma16g33660.1                                                       515   e-146
Glyma06g06590.1                                                       174   2e-43
Glyma16g33660.2                                                       140   4e-33
Glyma16g33660.3                                                       136   7e-32
Glyma13g18290.1                                                       102   2e-21
Glyma11g22530.1                                                        80   9e-15
Glyma10g04110.1                                                        69   1e-11

>Glyma09g29120.1 
          Length = 539

 Score =  556 bits (1434), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 315/547 (57%), Positives = 376/547 (68%), Gaps = 21/547 (3%)

Query: 1   MDPQTCEQSANEYDSSDFKSEK-ILQAVDKPIMCPTPEKKIEPLPVKSKDEQTQLPEKYR 59
           M+   CE+ +    +SDFK EK +L+ VD+ I+CPTP+K  EPL VK ++ QT LPEKY 
Sbjct: 1   MEQNACEELSK--IASDFKCEKKVLETVDESIVCPTPQKNEEPLIVKFREGQTNLPEKYS 58

Query: 60  TIADXXXXXXXXXXXXXXXKKPQTFQNICKQVEVLAERKFSYAHLARMKYILPEGILVDK 119
            + D               KK  TFQN+C+QVEVL++R+FS+AHLA+MKYILP+ + +DK
Sbjct: 59  ALVDLFGHTSCSLRLLRLCKKSPTFQNVCRQVEVLSKREFSHAHLAQMKYILPKSVCIDK 118

Query: 120 VLVHDKKSLCMKPDIKITLVFDVVEEHCELSADMALRRYFNSRLIDYFKMHPEAADIPEA 179
           VLVHDKKSLCM PD+KITL F+VV++    S D+ALRRYF S+LID+F MHPE ADIPEA
Sbjct: 119 VLVHDKKSLCMVPDMKITLRFEVVKDCSGESDDLALRRYFKSKLIDFFDMHPEVADIPEA 178

Query: 180 ILPEPCGQRSCHLISEDFP-----VISSTALSSTSNQIEQSPEKFNLYPSFTRHFSQKIV 234
            LPEP G+++C L  E+F      V SST L S SNQ E  PE+  LYPSF RHFS+K  
Sbjct: 179 PLPEPFGKKTCRLNFEEFTGQSPHVNSSTELLSISNQTEMLPEQLQLYPSFRRHFSRKNN 238

Query: 235 ADQTEKVHDLSSTKTCLSSDVSDCPDIPECERKGQKECAALSDHLN---TERGQQKESFS 291
            DQ EK      TKT  SS  SDC D  E E+  QKEC  L D +    TERG QKESFS
Sbjct: 239 TDQAEKAQCFLPTKTSPSSHASDCLDNEESEKTLQKECVPLFDGVANPITERGHQKESFS 298

Query: 292 ICYQPSVTNTPVRMFG--HSVSHGNSESPEVKMVSCV-DSFVIETPAQSAPGRLLPVSDD 348
           +  QPS  NTPV+M    +SV+  NSESP++K +SCV DSF+ ETPAQSAP RLLP+SD 
Sbjct: 299 MSLQPSFINTPVQMIRPPYSVTCSNSESPDMKNISCVADSFIAETPAQSAPARLLPISDV 358

Query: 349 KLQNMTYPKSTSCSKTAKRVLDFSGMESNEGLDNRVDISESSSATHEFHGIPQPSISFSE 408
           KLQ+M   KSTS  K AKRVLDFS M  N+GL   VD  ESS A HEF   P+ S    E
Sbjct: 359 KLQDMPTQKSTSSHKPAKRVLDFSLMGDNDGLGIGVDKLESSRALHEFDSFPESSRGCYE 418

Query: 409 DCNSFDSVALPLEVEESLGYSFEKTDQNQGGLGNKNISSLVDMVNVIGSIFQSVKRTPIT 468
           DCNSF SV+ P E EESL        Q      +K  S L+D+VNVI SIFQSV+R PIT
Sbjct: 419 DCNSFGSVSAPQEAEESLK-------QADLDTQHKKSSPLLDLVNVIHSIFQSVQRIPIT 471

Query: 469 KEELLQKIIMNSLDFDEIGEVEKQIEILEKLVPDWICKKLVSSGDVMYSIKKVSDLDSVR 528
           KEELL KI++N+LDF EI  VE+QIE LEKLVPDWICKKLV++GD MY I KVSDLDSVR
Sbjct: 472 KEELLHKILVNTLDFVEIRAVEEQIESLEKLVPDWICKKLVATGDTMYCINKVSDLDSVR 531

Query: 529 SRLFSNV 535
           SRL +NV
Sbjct: 532 SRLSTNV 538


>Glyma16g33660.1 
          Length = 1321

 Score =  515 bits (1327), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/500 (58%), Positives = 343/500 (68%), Gaps = 22/500 (4%)

Query: 58   YRTIADXXXXXXXXXXXXXXXKKPQTFQNICKQVEVLAERKFSYAHLARMKYILPEGILV 117
            Y T+AD               KK   FQN+C+QVEVL++RKFS+AHLA+MKYILP+ + +
Sbjct: 824  YSTLADLFGHMSCSLRLLHLCKKTPIFQNVCRQVEVLSKRKFSHAHLAQMKYILPKSVCI 883

Query: 118  DKVLVHDKKSLCMKPDIKITLVFDVVEEHCELSADMALRRYFNSRLIDYFKMHPEAADIP 177
            DKVLVHDKKSLCM  D+KITL F+VV++    SAD+ALRRYF S+LID+F MHPE ADIP
Sbjct: 884  DKVLVHDKKSLCMVTDMKITLKFEVVKDCSGESADLALRRYFKSKLIDFFDMHPEVADIP 943

Query: 178  EAILPEPCGQRSC-------HLISEDFP-----VISSTALSSTSNQIEQSPEKFNLYPSF 225
            EA LPEP G++SC       H+  E+F      V SST L S SNQ E  PE+  LYPSF
Sbjct: 944  EAPLPEPFGKKSCRSNCKDSHV--EEFTGQSPHVNSSTELFSISNQTEMLPEQLQLYPSF 1001

Query: 226  TRHFSQKIVADQTEKVHDLSSTKTCLSSDVSDCPDIPECERKGQKECAALSDHLNT---E 282
            +RHFS+K   DQ EK      TKT  SS   D  D  E E+  QKEC  L D +     E
Sbjct: 1002 SRHFSRKNNTDQAEKAQCFLPTKTSPSSHAFDFLDNEESEKTLQKECVPLYDDVANPIME 1061

Query: 283  RGQQKESFSICYQPSVTNTPVRMFG--HSVSHGNSESPEVKMVSC-VDSFVIETPAQSAP 339
            RG QKESFS+ ++PSV NTPV M    HSV+  +SESP +K +SC  DSF+ ETPAQSAP
Sbjct: 1062 RGHQKESFSMSFEPSVINTPVHMIHPPHSVTCSDSESPYLKNISCAADSFIAETPAQSAP 1121

Query: 340  GRLLPVSDDKLQNMTYPKSTSCSKTAKRVLDFSGMESNEGLDNRVDISESSSATHEFHGI 399
             RLLP+SD KLQ+M   KSTS  K AKRVLDFS ME N+GL   VD  ES    HEF   
Sbjct: 1122 ARLLPISDVKLQDMPTQKSTSSYKPAKRVLDFSLMEDNDGLGIEVDKLESIRDLHEFDSF 1181

Query: 400  PQPSISFSEDCNSFDSVALPLEVEESLGYSFEKTDQNQGGLG--NKNISSLVDMVNVIGS 457
            P+ S   SEDCNSF SV+ P E EESLGY+ EK  Q Q  L   +K  S L+++VNVI S
Sbjct: 1182 PESSRGCSEDCNSFGSVSAPQEAEESLGYASEKITQKQADLDTQHKKSSPLLNLVNVIHS 1241

Query: 458  IFQSVKRTPITKEELLQKIIMNSLDFDEIGEVEKQIEILEKLVPDWICKKLVSSGDVMYS 517
            IFQSV+R PITKEEL  KI+MN+LDF EI EVE+QIE LEKLVPDWICKKLV++GD +Y 
Sbjct: 1242 IFQSVQRIPITKEELQHKILMNTLDFVEIREVEEQIEYLEKLVPDWICKKLVATGDTVYC 1301

Query: 518  IKKVSDLDSVRSRLFSNVTV 537
            I KVSDLDSVRSRL SN TV
Sbjct: 1302 INKVSDLDSVRSRLSSNETV 1321



 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 2/57 (3%)

Query: 1  MDPQTCEQSANEYDSSDFKSEKILQAVDKPIMCPTPEKKIEPLPVKSKDEQTQLPEK 57
          M+   CE+ A    +SDFK EK+L+ VD+ I+CPTP+K  EPL VKS++ QT LPEK
Sbjct: 1  MELNACEELAK--IASDFKCEKVLKTVDESIVCPTPQKNKEPLTVKSREGQTNLPEK 55


>Glyma06g06590.1 
          Length = 394

 Score =  174 bits (442), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/163 (54%), Positives = 115/163 (70%), Gaps = 9/163 (5%)

Query: 15  SSDFKSEKILQAVDKPIMCPTPEKKIEPLPVKSKDEQTQLPEKYRTIADXXXXXXXXXXX 74
           +S+FK EK+L+ VD+ I+CPTP+K  EPL VKSK+ QT LPEKY T+AD           
Sbjct: 13  ASNFKCEKVLETVDESIVCPTPQKNEEPLTVKSKEGQTNLPEKYSTLADLFGHMSCSLRL 72

Query: 75  XXXXKKPQTFQNICKQVEVLAERKFSYAHLARMKYILPEGILVDKVLVHDKKSLCMKPDI 134
               KK   F+       + A RKFS+AHLA+MKYILP+ + +D+VLVHDKKSLC+ PD+
Sbjct: 73  LYLCKKAPIFK-------MFAARKFSHAHLAQMKYILPKSVYIDRVLVHDKKSLCVVPDM 125

Query: 135 KITLVFDVVEEHCELSADMALRRYFNSRLIDYFKMHPEAADIP 177
           KITL F+VV++    SAD+ALRRYF S+LID+F MHPE  D+P
Sbjct: 126 KITLKFEVVKDCFGESADLALRRYFKSKLIDFFDMHPE--DMP 166



 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 6/81 (7%)

Query: 341 RLLPVSDDKLQNMTYPKSTSCSKTAKRVLDFSGMESNEGLDNRVDISESSSATHEFHGIP 400
           +L+   D   ++M   KSTS  K AKRVLDFS ME N+GL   +D  ES  A HE     
Sbjct: 153 KLIDFFDMHPEDMPTQKSTSSYKPAKRVLDFSLMEDNDGLGIEMDKLESIRALHE----- 207

Query: 401 QPSISFSEDCNSFDSVALPLE 421
             S   SEDCNSF SV+ P E
Sbjct: 208 -SSRGCSEDCNSFGSVSAPQE 227


>Glyma16g33660.2 
          Length = 116

 Score =  140 bits (352), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 86/116 (74%)

Query: 57  KYRTIADXXXXXXXXXXXXXXXKKPQTFQNICKQVEVLAERKFSYAHLARMKYILPEGIL 116
           +Y T+AD               KK   FQN+C+QVEVL++RKFS+AHLA+MKYILP+ + 
Sbjct: 1   RYSTLADLFGHMSCSLRLLHLCKKTPIFQNVCRQVEVLSKRKFSHAHLAQMKYILPKSVC 60

Query: 117 VDKVLVHDKKSLCMKPDIKITLVFDVVEEHCELSADMALRRYFNSRLIDYFKMHPE 172
           +DKVLVHDKKSLCM  D+KITL F+VV++    SAD+ALRRYF S+LID+F MHPE
Sbjct: 61  IDKVLVHDKKSLCMVTDMKITLKFEVVKDCSGESADLALRRYFKSKLIDFFDMHPE 116


>Glyma16g33660.3 
          Length = 96

 Score =  136 bits (342), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 81/96 (84%)

Query: 442 NKNISSLVDMVNVIGSIFQSVKRTPITKEELLQKIIMNSLDFDEIGEVEKQIEILEKLVP 501
           +K  S L+++VNVI SIFQSV+R PITKEEL  KI+MN+LDF EI EVE+QIE LEKLVP
Sbjct: 1   HKKSSPLLNLVNVIHSIFQSVQRIPITKEELQHKILMNTLDFVEIREVEEQIEYLEKLVP 60

Query: 502 DWICKKLVSSGDVMYSIKKVSDLDSVRSRLFSNVTV 537
           DWICKKLV++GD +Y I KVSDLDSVRSRL SN TV
Sbjct: 61  DWICKKLVATGDTVYCINKVSDLDSVRSRLSSNETV 96


>Glyma13g18290.1 
          Length = 513

 Score =  102 bits (253), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 44  PVKSKDEQTQLPEKYRTIADXXXXXXXXXXXXXXXKKPQTFQNICKQVEVLAERKFSYAH 103
           P+ ++DE + LPEKY  + +               +   TF +I  ++E L +R+F+++H
Sbjct: 105 PMATEDESSNLPEKYEILDEFFNRLDTLVSLHRLKRWTPTFTSISSRIESLTDRRFTHSH 164

Query: 104 LARMKYILPEGILVDKVLVHDKKSLCMKPDIKITLVFDVVEEHCE----LSADMALRRYF 159
           LA++K+IL + I++ K LV D+++ CMKPDI I+L  D VE            ++L++ F
Sbjct: 165 LAQLKFILRKAIVLRKHLVLDERTSCMKPDIHISLDPDAVEADAAKLPPQGGRVSLKKVF 224

Query: 160 NSRLIDYFKMHPEAADIPEAILPEPCGQ 187
            +RL ++++ HPE  +IPE  LPEP  +
Sbjct: 225 RARLKEFWESHPEGDEIPEGTLPEPFNR 252



 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 436 NQGGLGNKNISSLVDMVNVIGSIFQSVKRTPITKEELLQKIIMNSLDFDEIGEVEKQIEI 495
            Q     KNI+S+  + ++I  + +  +R  ITK EL+ KII    D  +  EVE+Q+ +
Sbjct: 416 TQAKKRKKNIASIPKLFDMIRGLLR--QRNCITKAELVSKIISTRCDIADRSEVEEQLNL 473

Query: 496 LEKLVPDWICKKLVSSGDVMYSIKKVSDLDSVRSRL 531
           L++L P+WI +K V SGD++  I K+   ++VR+ L
Sbjct: 474 LQELAPEWIYEKHVYSGDLLLFINKMLSPETVRASL 509


>Glyma11g22530.1 
          Length = 236

 Score = 79.7 bits (195), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 57/108 (52%), Gaps = 40/108 (37%)

Query: 37  EKKIEPLPVKSKDEQTQLPEKYRTIADXXXXXXXXXXXXXXXKKPQTFQNICKQVEVLAE 96
           EK  EPL VKS++ QT LPEK                                       
Sbjct: 48  EKNEEPLTVKSREGQTNLPEK--------------------------------------- 68

Query: 97  RKFSYAHLARMKYILPEGILVDKVLVHDKKSLCMKPDIKITLVFDVVE 144
            KFS+AHLA+MKYILP+ + +D+VLVHDKKSLCM PD+KITL F+ V 
Sbjct: 69  -KFSHAHLAQMKYILPKSVCIDRVLVHDKKSLCMVPDMKITLKFEFVR 115



 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 36/54 (66%)

Query: 341 RLLPVSDDKLQNMTYPKSTSCSKTAKRVLDFSGMESNEGLDNRVDISESSSATH 394
           RLLP+SD KLQ+M   KSTS  K  KRVLDFS ME N+GL   VD  ES  A H
Sbjct: 115 RLLPISDVKLQDMPTQKSTSSYKPGKRVLDFSLMEDNDGLGIEVDKLESIRALH 168


>Glyma10g04110.1 
          Length = 596

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 4/112 (3%)

Query: 422 VEESLGYSFEKTDQ--NQGGLGNKNISSLVDMVNVIGSIFQSVKRTPITKEELLQKIIMN 479
           + E    + EK D    +     KNI+SL  + ++I  + +  +R  ITK EL+ KII +
Sbjct: 483 IREKERLAMEKRDPAITEAKKRKKNIASLPKLFDMIRGLLR--QRNCITKAELVSKIISS 540

Query: 480 SLDFDEIGEVEKQIEILEKLVPDWICKKLVSSGDVMYSIKKVSDLDSVRSRL 531
             D  +  EVE+Q+ +L++L P+WI +K VSSGD++  I K+   ++VR+ L
Sbjct: 541 RCDIADRSEVEEQLNLLQELAPEWISEKQVSSGDLLLFINKMLSPETVRASL 592