Miyakogusa Predicted Gene

Lj0g3v0131529.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131529.1 Non Chatacterized Hit- tr|I1JXG4|I1JXG4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.48,0,Elongator
protein 3, MiaB family, Radical SA,Elongator protein 3/MiaB/NifB;
Radical_SAM,Radical SAM;,CUFF.7995.1
         (485 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g36780.1                                                       725   0.0  
Glyma06g18160.1                                                       679   0.0  

>Glyma04g36780.1 
          Length = 486

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/489 (76%), Positives = 418/489 (85%), Gaps = 11/489 (2%)

Query: 1   MLKSTFSPIFWVLAPKPKYPKLSPHAITNTFSNRTPV-VRHNSSMKHPIITAPLPSSAYI 59
           MLKSTF+PIFWVL PKPK PKL P AITNTF   +   VRHN+ +     T P PSSAYI
Sbjct: 1   MLKSTFTPIFWVLTPKPKPPKLPPQAITNTFFTSSTTHVRHNAPLN--PTTPPPPSSAYI 58

Query: 60  HLPFCRKRCHYCDFTIIALGSAASTQTDNDPRVLNYIQWLCREINATEVEEVSK----TP 115
           HLPFCRKRCHYCDF I+ALGSA STQT++DPRV NYI WLCREI+AT V++ +     TP
Sbjct: 59  HLPFCRKRCHYCDFPIVALGSA-STQTNDDPRVSNYIHWLCREISATNVDQPADASTITP 117

Query: 116 LQTVYFGGGTPSLVPPSMVSLVMESLRKKFGLSEDAEISMEMDPGTFDAKKMREMMLLGV 175
           L+TVYFGGGTPSLVPP MV+ V+++LR KFGL EDAEISMEMDPGTFDA+KMREM++LGV
Sbjct: 118 LKTVYFGGGTPSLVPPRMVASVLDTLRLKFGLREDAEISMEMDPGTFDAEKMREMVVLGV 177

Query: 176 NRVSLGVQAFQEKLLMTCGRAHGVKEVYEAIDIVKSCGVENWSMDLIASLPHQTLDMWEE 235
           NRVSLGVQAFQE+LL  CGRAHG+KEV+EAID+VK CGVENWS+DLI+SLPHQT +MWEE
Sbjct: 178 NRVSLGVQAFQEELLRACGRAHGLKEVHEAIDVVKLCGVENWSIDLISSLPHQTSEMWEE 237

Query: 236 SLRLTIEAQPNHVSVYDLQIEQGTKFARQYSPGEFPLPSETQSADFYKMASRRLYEASYN 295
           SLRL IE+QP HVSVYDLQIEQGTKF R YSPGEFP+PSETQSA+FYKMASR L +A+YN
Sbjct: 238 SLRLAIESQPTHVSVYDLQIEQGTKFGRLYSPGEFPMPSETQSAEFYKMASRMLSDANYN 297

Query: 296 HYEISSYCKSGYESKHNFTYWENKPFYGFGLGSASFIGGLRFSRPKKVNDYVSYVQNLEN 355
           HYEISSYCKSGYE KHNF YW+NKPFYGFGLGS SF+GGLRFSRP+KVNDY+++VQNLEN
Sbjct: 298 HYEISSYCKSGYECKHNFIYWKNKPFYGFGLGSTSFVGGLRFSRPRKVNDYINFVQNLEN 357

Query: 356 GLVNSSADEDNLVKDRAMDVVMLSLRTSRGLDLKCFQESFGSSVVLSLIEAYKPYFESGH 415
           GLVNSS       KD  MDVVMLSLRT++G+DLK FQESFGSSVVLSL+EAYKPY ESG 
Sbjct: 358 GLVNSSVKGHISGKDTIMDVVMLSLRTAQGIDLKSFQESFGSSVVLSLLEAYKPYVESGL 417

Query: 416 VVCLDEQRRTISIDDDGLSNSLLGKTNTERRLVYLRLSDPEGFLLSNELIALAFGVIDSW 475
           VVCLDE RRTI IDD    NS L KTN E R+ Y+RLSDPEGFLLSNELIALAFGVIDSW
Sbjct: 418 VVCLDEHRRTIRIDD---LNSSLSKTNAEGRVAYIRLSDPEGFLLSNELIALAFGVIDSW 474

Query: 476 KDCPPCQEA 484
           KD PP +EA
Sbjct: 475 KDMPPYKEA 483


>Glyma06g18160.1 
          Length = 457

 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/475 (72%), Positives = 385/475 (81%), Gaps = 23/475 (4%)

Query: 1   MLKSTFSPIFWVLAPKPKYPKLSPHAITNTF-SNRTPVVRHNSSMKHPIITAPLPSSAYI 59
           MLKSTF+PIFWVL PKPK PKL  HAITNTF ++  P VRHN+ +    IT P  SSAYI
Sbjct: 1   MLKSTFTPIFWVLTPKPKPPKLPSHAITNTFFTSSMPHVRHNAPVNP--ITPPPASSAYI 58

Query: 60  HLPFCRKRCHYCDFTIIALGSAASTQTDNDPRVLNYIQWLCREINATEVEEVSK----TP 115
           HLPFCRKRCHYCDF I+ALGS  S   D+DPRV NYI WLCREINAT V++       TP
Sbjct: 59  HLPFCRKRCHYCDFPIVALGST-SALIDDDPRVSNYIHWLCREINATNVDQPDDANTITP 117

Query: 116 LQTVYFGGGTPSLVPPSMVSLVMESLRKKFGLSEDAEISMEMDPGTFDAKKMREMMLLGV 175
           LQTVYFGGGTPSLVPP MVS V+++LR KFGL ED EISMEMDPGTFDA+KMR       
Sbjct: 118 LQTVYFGGGTPSLVPPRMVSSVLDTLRTKFGLREDVEISMEMDPGTFDAEKMR------- 170

Query: 176 NRVSLGVQAFQEKLLMTCGRAHGVKEVYEAIDIVKSCGVENWSMDLIASLPHQTLDMWEE 235
                G+ AF+E+LL  CGRAHG+KEV+EAID+VK C VENWS+DLIASLPHQT DMWEE
Sbjct: 171 -----GMVAFREELLRACGRAHGLKEVHEAIDVVKLCEVENWSIDLIASLPHQTSDMWEE 225

Query: 236 SLRLTIEAQPNHVSVYDLQIEQGTKFARQYSPGEFPLPSETQSADFYKMASRRLYEASYN 295
           SLRL IEAQP HVSVYDLQIEQGTKF R YS GEFP+PSETQSA+FYKMASR L +A+YN
Sbjct: 226 SLRLAIEAQPTHVSVYDLQIEQGTKFGRLYSLGEFPMPSETQSAEFYKMASRMLSDANYN 285

Query: 296 HYEISSYCKSGYESKHNFTYWENKPFYGFGLGSASFIGGLRFSRPKKVNDYVSYVQNLEN 355
           HYEISSYCKSGYE KHNF YW+NKPFYGFGL SASF+GGLRFSRP+KVNDY+++VQNLEN
Sbjct: 286 HYEISSYCKSGYECKHNFIYWKNKPFYGFGLCSASFVGGLRFSRPRKVNDYINFVQNLEN 345

Query: 356 GLVNSSADEDNLVKDRAMDVVMLSLRTSRGLDLKCFQESFGSSVVLSLIEAYKPYFESGH 415
           G VNSS +     KD  MDVVMLSLRT++G+DL   QESFGSS+VLSL+EAYK YFESGH
Sbjct: 346 GFVNSSVEGHIHGKDTVMDVVMLSLRTAQGIDLMSLQESFGSSIVLSLLEAYKTYFESGH 405

Query: 416 VVCLDEQRRTISIDDDGLSNSLLGKTNTERRLVYLRLSDPEGFLLSNELIALAFG 470
           VVCLDE RRT+ IDD    NS L  TN E R+ Y+RLSDPEGFLLSNELIA+AFG
Sbjct: 406 VVCLDEYRRTVRIDD---LNSFLNNTNAEGRVAYIRLSDPEGFLLSNELIAIAFG 457