Miyakogusa Predicted Gene

Lj0g3v0130849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0130849.1 Non Chatacterized Hit- tr|K0SCL8|K0SCL8_THAOC
Uncharacterized protein OS=Thalassiosira oceanica
PE=4,29.45,1e-18,PREDICTED PROTEIN,NULL; DNA MISMATCH REPAIR MUTS
RELATED PROTEINS,NULL; no description,NULL; P-loop ,CUFF.7939.1
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g26450.1                                                       412   e-115
Glyma20g17660.1                                                       374   e-104
Glyma19g40350.1                                                        59   5e-09
Glyma17g13050.1                                                        55   9e-08
Glyma07g09660.1                                                        52   5e-07
Glyma09g32150.1                                                        50   3e-06

>Glyma10g26450.1 
          Length = 975

 Score =  412 bits (1058), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/286 (76%), Positives = 241/286 (84%), Gaps = 8/286 (2%)

Query: 1   MSELRSIITGTTKRSLVLVDEICRGTETAKGTCIAGSIIETLDRVGCLGIVSTHLHGIFA 60
           MSELRSII GTT RSLVLVDEICRGTETAKGTCIAGSIIETLD +GCLGIVSTHLHGIF 
Sbjct: 676 MSELRSIIGGTTNRSLVLVDEICRGTETAKGTCIAGSIIETLDGIGCLGIVSTHLHGIFT 735

Query: 61  LPLNIKNTLHKAMGTECIDGQTKPTWKLTDGVCKESLAFETAKREGIPEIVIKRAEDLYL 120
           LPLN KNT+HKAMGT  IDGQ  PTWKLTDGVCKESLAFETAKREGIPE +++RAE LY 
Sbjct: 736 LPLNKKNTVHKAMGTTSIDGQIMPTWKLTDGVCKESLAFETAKREGIPEHIVRRAEYLYQ 795

Query: 121 SVYAEKPHSAENFPKQEKHSTYIDVNNFNGTHLHPKKYISGASIEGINLANPIEVLQREV 180
            VYA++   AENFP +EK ST I+VNN NGTHLH K+++SG        AN +EVL+ EV
Sbjct: 796 LVYAKEMLFAENFPNEEKFSTCINVNNLNGTHLHSKRFLSG--------ANQMEVLREEV 847

Query: 181 ESAITVICQDLIMELQRKKIASELTKIKCFLIGTRERPPPSTIGSSSVYVMLRPDKKLYI 240
           E A+TVICQD I +L+ KKIA ELT+IKC +IGTRE PPPS +GSSSVYVM RPDKKLY+
Sbjct: 848 ERAVTVICQDHIKDLKCKKIALELTEIKCLIIGTRELPPPSVVGSSSVYVMFRPDKKLYV 907

Query: 241 GETDDLEGRVQAHPSKEGMHDATFLYFLAPGKSLACQIESLLINQL 286
           GETDDLEGRV+ H  KEGMHDA+FLYFL PGKSLACQ ESLLINQL
Sbjct: 908 GETDDLEGRVRRHRLKEGMHDASFLYFLVPGKSLACQFESLLINQL 953


>Glyma20g17660.1 
          Length = 665

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/288 (70%), Positives = 230/288 (79%), Gaps = 25/288 (8%)

Query: 1   MSELRSIITGTTKRSLVLVDEICRGTETAKGTCIAGSIIETLDRVGCLGIVSTHLHGIFA 60
           MSELRSII GTTK+SLVL+DEICRGTETAKGTCIAGSIIETLDR+GCLGIVSTHLHGIF 
Sbjct: 383 MSELRSIIGGTTKKSLVLIDEICRGTETAKGTCIAGSIIETLDRIGCLGIVSTHLHGIFT 442

Query: 61  LPLNIKNTLHKAMGTECIDGQTKPTWKLTDGVCKESLAFETAKREGIPEIVIKRAEDLYL 120
           LPLNI NT+HKAMGT  IDGQT PTWKLTDGVC+ESLAFETA+REG+PE++I+RAE +Y 
Sbjct: 443 LPLNINNTVHKAMGTTSIDGQTIPTWKLTDGVCRESLAFETARREGVPELIIRRAEYIYQ 502

Query: 121 SVYAEKPHSAENFPKQEKHSTYIDVNNFNGTHLHPKKYISGASIEGINLANPIEVLQREV 180
           SVYA++    +     EK S             + KK++SG        AN  EVL+ EV
Sbjct: 503 SVYAKE----KELLSAEKSS-------------NEKKFLSG--------ANQTEVLREEV 537

Query: 181 ESAITVICQDLIMELQRKKIASELTKIKCFLIGTRERPPPSTIGSSSVYVMLRPDKKLYI 240
           ESA+TVICQD IME + K IA ELT IKC  I TRE+PPPS +GSSSVYVM RPDKKLY+
Sbjct: 538 ESAVTVICQDHIMEQKSKNIALELTGIKCLQIRTREQPPPSVVGSSSVYVMFRPDKKLYV 597

Query: 241 GETDDLEGRVQAHPSKEGMHDATFLYFLAPGKSLACQIESLLINQLPN 288
           GETDDLEGRV+AH  KEGMHDA+FLYFL PGKSLACQ+ESLLINQL +
Sbjct: 598 GETDDLEGRVRAHRLKEGMHDASFLYFLVPGKSLACQLESLLINQLSS 645


>Glyma19g40350.1 
          Length = 1273

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)

Query: 1    MSELRSIITGTTKRSLVLVDEICRGTETAKGTCIAGSIIETLDR-VGCLGIVSTHLHGIF 59
            +SE  S+++  T  SLV +DE+ RGT T+ G  IA S++E L R V C G+ STH H + 
Sbjct: 1086 LSETASMLSSATCNSLVALDELGRGTATSDGQAIAESVLEHLVRKVQCRGLFSTHYHRLA 1145

Query: 60   ALPLNIKNTLHKAMGTECIDG-----QTKPTWKLTDGVCKESLAFETAKREGIPEIVIKR 114
               L         M  +   G     +    ++LT G C +S     A+  G+P  V+++
Sbjct: 1146 VDYLKDPKVCLCHMACQVGSGIAGLDEVTFLYRLTPGACPKSYGVNVARIAGLPTSVLQK 1205

Query: 115  A 115
            A
Sbjct: 1206 A 1206


>Glyma17g13050.1 
          Length = 942

 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 12/129 (9%)

Query: 1   MSELRSIITGTTKRSLVLVDEICRGTETAKGTCIAGSIIE-TLDRVGCLGIVSTHLHGIF 59
           M E  SI+ G T +SL+++DE+ RGT T  G  +A +I E  ++ +    + +TH H + 
Sbjct: 727 MLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATHFHELT 786

Query: 60  ALPL-NIKNTLHKAM-------GTECIDGQTKP---TWKLTDGVCKESLAFETAKREGIP 108
           AL L N+ N   K +        +  ID  T+     +K+  G C +S     A+    P
Sbjct: 787 ALALENVSNDSQKQIVGVANYHVSAHIDSSTRKLTMLYKVEPGACDQSFGIHVAEFANFP 846

Query: 109 EIVIKRAED 117
           E V+  A +
Sbjct: 847 ESVVTLARE 855


>Glyma07g09660.1 
          Length = 1053

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 20/129 (15%)

Query: 2   SELRSIITGTTKRSLVLVDEICRGTETAKGTCIAGSIIETL-DRVGCLGIVSTHLHGI-- 58
           +E  S++   T+ SLV++DE+ RGT T  G  IA ++   L ++V C  + +TH H +  
Sbjct: 860 TETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHPLTK 919

Query: 59  ------------FALPLNIKNTLHKAMGTECIDGQTKPTWKLTDGVCKESLAFETAKREG 106
                        A   N K+  H     E +       ++L  G C ES   + A   G
Sbjct: 920 EFASHPRVIMQHMACAFNSKSDTHSMRDQELV-----FLYRLASGPCPESYGLQVALMAG 974

Query: 107 IPEIVIKRA 115
           IPE  +  A
Sbjct: 975 IPEKTVNIA 983


>Glyma09g32150.1 
          Length = 1093

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 40/221 (18%)

Query: 7    IITGTTKRSLVLVDEICRGTETAKGTCIAGSIIETL-DRVGCLGIVSTHLHGI------- 58
            ++   T+ SLV++DE+ RGT T  G  IA ++   L ++V C  + +TH H +       
Sbjct: 868  VLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHSLTKEFASH 927

Query: 59   -------FALPLNIKNTLHKAMGTECIDGQTKPTWKLTDGVCKESLAFETAKREGIPEIV 111
                    A     K+  H     E +       ++L  G C ES   + A   GIPE  
Sbjct: 928  PRVIMQHMACAFKSKSDTHSMRDQELV-----FLYRLASGPCPESYGLQVALMAGIPEKT 982

Query: 112  IKRAEDLYLSVYAEKPHSAENFPKQEKHSTYIDVNNFNGTHLHPKKYISGASIEGINLAN 171
            +  A     +    K    ++F   E+ S +        + LH +   +  SI  I   N
Sbjct: 983  VNIASK---ASQQMKKSIGQSFRSSEQRSEF--------STLHEEWLKTLVSISRIEDCN 1031

Query: 172  PIEVLQREVESAI-TVICQDLIMELQRKKIASELTKIKCFL 211
             ++      E A+ T+IC  L  EL+   I+  L      L
Sbjct: 1032 SLD------EDALDTLIC--LWYELKTSFISGNLQSFSFML 1064