Miyakogusa Predicted Gene

Lj0g3v0130529.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0130529.1 Non Chatacterized Hit- tr|I3SRU7|I3SRU7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,100,0,no
description,NULL; SMALL NUCLEAR RIBONUCLEOPROTEIN SM,NULL;
LSM,Ribonucleoprotein LSM domain; seg,,CUFF.7914.1
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52210.1                                                       186   5e-48
Glyma02g10640.1                                                       186   5e-48
Glyma19g33700.1                                                       184   2e-47
Glyma03g30880.1                                                       184   2e-47
Glyma02g10640.2                                                       119   7e-28
Glyma08g15260.1                                                        53   9e-08
Glyma05g31950.1                                                        53   9e-08
Glyma05g31950.2                                                        49   9e-07

>Glyma18g52210.1 
          Length = 115

 Score =  186 bits (472), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/99 (96%), Positives = 98/99 (98%), Gaps = 1/99 (1%)

Query: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
          MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGGKPL 99
          RGNNIRYYILPDSLNLETLLVEETP++KPKKPTA GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPKIKPKKPTA-GKPL 98


>Glyma02g10640.1 
          Length = 116

 Score =  186 bits (472), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/99 (96%), Positives = 98/99 (98%), Gaps = 1/99 (1%)

Query: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
          MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGGKPL 99
          RGNNIRYYILPDSLNLETLLVEETP++KPKKPTA GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPKIKPKKPTA-GKPL 98


>Glyma19g33700.1 
          Length = 114

 Score =  184 bits (467), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/99 (94%), Positives = 97/99 (97%), Gaps = 1/99 (1%)

Query: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
          MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGGKPL 99
          RGNNIRYYILPDSLNLETLLVEE P++KPKKPTA GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEEAPKIKPKKPTA-GKPL 98


>Glyma03g30880.1 
          Length = 114

 Score =  184 bits (467), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/99 (94%), Positives = 97/99 (97%), Gaps = 1/99 (1%)

Query: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60
          MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 61 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGGKPL 99
          RGNNIRYYILPDSLNLETLLVEE P++KPKKPTA GKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEEAPKIKPKKPTA-GKPL 98


>Glyma02g10640.2 
          Length = 81

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/64 (95%), Positives = 63/64 (98%), Gaps = 1/64 (1%)

Query: 36 MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG 95
          MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETP++KPKKPTA 
Sbjct: 1  MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPKIKPKKPTA- 59

Query: 96 GKPL 99
          GKPL
Sbjct: 60 GKPL 63


>Glyma08g15260.1 
          Length = 131

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%)

Query: 4   VRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGN 63
           V+ L + +   V++ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 9   VKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 64  NIRYYILPDSLNLETLLVEETPRVKPKKPTAG 95
            +R+ ++PD L    +      R+K K  + G
Sbjct: 69  KVRFMVIPDMLKNAPMFKRLDARIKGKGASLG 100


>Glyma05g31950.1 
          Length = 131

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%)

Query: 4   VRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGN 63
           V+ L + +   V++ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 9   VKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 64  NIRYYILPDSLNLETLLVEETPRVKPKKPTAG 95
            +R+ ++PD L    +      R+K K  + G
Sbjct: 69  KVRFMVIPDMLKNAPMFKRLDARIKGKGASLG 100


>Glyma05g31950.2 
          Length = 117

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 46/85 (54%)

Query: 4  VRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGN 63
          V+ L + +   V++ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 9  VKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 64 NIRYYILPDSLNLETLLVEETPRVK 88
           +R+ ++PD L    +      R+K
Sbjct: 69 KVRFMVIPDMLKNAPMFKRLDARIK 93