Miyakogusa Predicted Gene

Lj0g3v0129799.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129799.1 tr|C1FFV7|C1FFV7_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_60644
,25.91,8e-16,seg,NULL; DUF3414,Protein of unknown function
DUF3414,CUFF.7857.1
         (364 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02760.1                                                       265   8e-71

>Glyma12g02760.1 
          Length = 436

 Score =  265 bits (676), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 140/240 (58%), Positives = 157/240 (65%), Gaps = 51/240 (21%)

Query: 128 MLIQYYKERQCLLKCIRWIFMHA---IYIDPVSEKSTVKEEARKLLHDGLESKLVSFFEG 184
           ML+QYYKERQCLLKCIRWI MHA   +  D ++  +T+KEEARKL HDGLE+KL+ FF  
Sbjct: 1   MLVQYYKERQCLLKCIRWILMHASKCVMFDFMA-NNTMKEEARKLFHDGLENKLILFFSN 59

Query: 185 LLSCSYPEQMDIDLFTLWAEETLIEDNLVLDILFLTYYDSFCTCSGEIWKKFAALYKGII 244
           LLSCS+PEQM                                               GI+
Sbjct: 60  LLSCSFPEQM-----------------------------------------------GIL 72

Query: 245 GGDYNLGKLAITTEAQELSYHIKVQXXXXXXXXXXXXXXXQMVHDEIPYRKGVFTFSLTD 304
            GDYNLGKL+ITTE Q+LSYH KVQ               QMVHDE+PYRKGV TFS+TD
Sbjct: 73  AGDYNLGKLSITTETQQLSYHAKVQLLLILIETLNLENVLQMVHDEVPYRKGVSTFSMTD 132

Query: 305 IQEMDALVSTFSVFEMNEAGPLVLAWAVFLYLLLTLPEKDDNNELMEIDHIGYVRQAFEA 364
           +QEMDALVSTF+ FEM EAGPLVLAWAVFLYLLLTL EKD+NNELMEIDHI YVRQAFEA
Sbjct: 133 VQEMDALVSTFNAFEMKEAGPLVLAWAVFLYLLLTLVEKDENNELMEIDHISYVRQAFEA 192