Miyakogusa Predicted Gene

Lj0g3v0129789.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129789.1 Non Chatacterized Hit- tr|A5BQP2|A5BQP2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.73,3e-17,seg,NULL; Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,CUFF.8017.1
         (590 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g10460.1                                                       231   1e-60
Glyma04g00710.1                                                       220   3e-57

>Glyma11g10460.1 
          Length = 173

 Score =  231 bits (590), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 118/155 (76%), Positives = 128/155 (82%), Gaps = 2/155 (1%)

Query: 3   IFTRRQGALLCFWLSVFFVVVGFCHGD-STVEVVGLGECADCKEYNIKTSQAFSGLRVTI 61
           I TRRQGA LCFWLSV FVVV FC+GD STVEVVGLGECADCKE NI+TSQAFSGLRVT+
Sbjct: 5   ILTRRQGAFLCFWLSVLFVVVDFCYGDHSTVEVVGLGECADCKEKNIQTSQAFSGLRVTV 64

Query: 62  DCKAENGHFKTRGAGELDTNGNFKVSLPHDIVKSGELKEECYAQLHSSSAAPCPAHDGLH 121
           DCKA +G+F+ RG GELD  GNFKVSLPHD VK  +L EECYAQL S+SAAPCP HDG  
Sbjct: 65  DCKAASGNFERRGVGELDEYGNFKVSLPHDTVKDDKLIEECYAQLLSASAAPCPTHDGPL 124

Query: 122 DTKIVFKSKTDDNKHTLGPAGKLKFSSMTCTSEFF 156
             KIV KSKT++ KHTLGPAGKLKFSS T   EFF
Sbjct: 125 SHKIVIKSKTNNEKHTLGPAGKLKFSSQT-YDEFF 158


>Glyma04g00710.1 
          Length = 311

 Score =  220 bits (561), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 112/165 (67%), Positives = 133/165 (80%), Gaps = 7/165 (4%)

Query: 1   MQIFTRRQGALLCFWL-SVFFVVVGFCHGD-STVEVVGLGECADCKEYNIKTSQAFSGLR 58
           MQIF  RQGAL+CFWL SVFFVV GF + +  TVEVVGLGECADC++ NIK + AFSGLR
Sbjct: 1   MQIFIGRQGALVCFWLLSVFFVVTGFNNEEHRTVEVVGLGECADCRQNNIKNNHAFSGLR 60

Query: 59  VTIDCKAENGHFKTRGAGELDTNGNFKVSLPHDIVKSGELKEECYAQLHSSSAAPCPAHD 118
           VT+DCK+ +GHF+TRGAG LD  GNFKVSLP D+V+ GELKE+CYAQLHS+SA PCP+H 
Sbjct: 61  VTVDCKSRHGHFRTRGAGALDEYGNFKVSLPQDMVEDGELKEDCYAQLHSASAEPCPSHG 120

Query: 119 GLHDTKIVFKSKTDDNKHTLGP-AGKLKFSSMTCTSEFFWPFFKH 162
              ++KIV +S ++D  HTL P AGKL+FSS  CTS FFW FFKH
Sbjct: 121 ---NSKIVTRSVSEDT-HTLAPAAGKLRFSSALCTSAFFWHFFKH 161