Miyakogusa Predicted Gene

Lj0g3v0129539.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129539.3 tr|B9GY61|B9GY61_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_647445 PE=4
SV=1,91.18,0.000000001,seg,NULL,CUFF.7840.3
         (217 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g30080.2                                                       362   e-100
Glyma05g30080.1                                                       362   e-100
Glyma08g13220.2                                                       359   1e-99
Glyma08g13220.1                                                       359   1e-99
Glyma03g20620.1                                                        88   6e-18

>Glyma05g30080.2 
          Length = 2150

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/194 (91%), Positives = 179/194 (92%)

Query: 1    MMEDAVHFLSKETVVQTIARSATKTRNALSGTYSAPQRSASSAALLIGDPTAMLDRAGNF 60
            MMEDAVHFL KETV+Q IARSATKTRNALSGTYSAPQRSASSAALLIGDPT M DRAGNF
Sbjct: 1101 MMEDAVHFLGKETVIQAIARSATKTRNALSGTYSAPQRSASSAALLIGDPTIMRDRAGNF 1160

Query: 61   VLPRADVMKLRDRLRNEELVAGSFFSRLRYGRTFRHDPTSDVDHRRVMCAHARILALEEA 120
            VLPRADVMKLRDRLRNEELVAGSFFSRLRY RTFRH+PTSDVDHRRVMCAHARILALEEA
Sbjct: 1161 VLPRADVMKLRDRLRNEELVAGSFFSRLRYHRTFRHEPTSDVDHRRVMCAHARILALEEA 1220

Query: 121  IDTEWVYMWDKFXXXXXXXXXXTSKAEQAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR 180
            IDTEWVYMWDKF          TSKAEQAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR
Sbjct: 1221 IDTEWVYMWDKFGGYLLLLLGLTSKAEQAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR 1280

Query: 181  RQFEIIQESYIREK 194
            RQFEIIQESYIREK
Sbjct: 1281 RQFEIIQESYIREK 1294


>Glyma05g30080.1 
          Length = 2150

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/194 (91%), Positives = 179/194 (92%)

Query: 1    MMEDAVHFLSKETVVQTIARSATKTRNALSGTYSAPQRSASSAALLIGDPTAMLDRAGNF 60
            MMEDAVHFL KETV+Q IARSATKTRNALSGTYSAPQRSASSAALLIGDPT M DRAGNF
Sbjct: 1101 MMEDAVHFLGKETVIQAIARSATKTRNALSGTYSAPQRSASSAALLIGDPTIMRDRAGNF 1160

Query: 61   VLPRADVMKLRDRLRNEELVAGSFFSRLRYGRTFRHDPTSDVDHRRVMCAHARILALEEA 120
            VLPRADVMKLRDRLRNEELVAGSFFSRLRY RTFRH+PTSDVDHRRVMCAHARILALEEA
Sbjct: 1161 VLPRADVMKLRDRLRNEELVAGSFFSRLRYHRTFRHEPTSDVDHRRVMCAHARILALEEA 1220

Query: 121  IDTEWVYMWDKFXXXXXXXXXXTSKAEQAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR 180
            IDTEWVYMWDKF          TSKAEQAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR
Sbjct: 1221 IDTEWVYMWDKFGGYLLLLLGLTSKAEQAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR 1280

Query: 181  RQFEIIQESYIREK 194
            RQFEIIQESYIREK
Sbjct: 1281 RQFEIIQESYIREK 1294


>Glyma08g13220.2 
          Length = 2151

 Score =  359 bits (922), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 176/194 (90%), Positives = 179/194 (92%)

Query: 1    MMEDAVHFLSKETVVQTIARSATKTRNALSGTYSAPQRSASSAALLIGDPTAMLDRAGNF 60
            MMEDAVHFL KETV+Q IARSATKTRNALSGTYSAPQRSASSAALLIGDPT M DRAGNF
Sbjct: 1102 MMEDAVHFLGKETVIQAIARSATKTRNALSGTYSAPQRSASSAALLIGDPTIMRDRAGNF 1161

Query: 61   VLPRADVMKLRDRLRNEELVAGSFFSRLRYGRTFRHDPTSDVDHRRVMCAHARILALEEA 120
            VLPRADVMKLRDRLRNEELVAGSFFSRLRY RTFRH+PTSDVDHRRVMCAHARILALEEA
Sbjct: 1162 VLPRADVMKLRDRLRNEELVAGSFFSRLRYHRTFRHEPTSDVDHRRVMCAHARILALEEA 1221

Query: 121  IDTEWVYMWDKFXXXXXXXXXXTSKAEQAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR 180
            IDTEWVYMWDKF          TSKAE+AQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR
Sbjct: 1222 IDTEWVYMWDKFGGYLLLLLGLTSKAERAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR 1281

Query: 181  RQFEIIQESYIREK 194
            RQFEIIQESYIREK
Sbjct: 1282 RQFEIIQESYIREK 1295


>Glyma08g13220.1 
          Length = 2151

 Score =  359 bits (922), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 176/194 (90%), Positives = 179/194 (92%)

Query: 1    MMEDAVHFLSKETVVQTIARSATKTRNALSGTYSAPQRSASSAALLIGDPTAMLDRAGNF 60
            MMEDAVHFL KETV+Q IARSATKTRNALSGTYSAPQRSASSAALLIGDPT M DRAGNF
Sbjct: 1102 MMEDAVHFLGKETVIQAIARSATKTRNALSGTYSAPQRSASSAALLIGDPTIMRDRAGNF 1161

Query: 61   VLPRADVMKLRDRLRNEELVAGSFFSRLRYGRTFRHDPTSDVDHRRVMCAHARILALEEA 120
            VLPRADVMKLRDRLRNEELVAGSFFSRLRY RTFRH+PTSDVDHRRVMCAHARILALEEA
Sbjct: 1162 VLPRADVMKLRDRLRNEELVAGSFFSRLRYHRTFRHEPTSDVDHRRVMCAHARILALEEA 1221

Query: 121  IDTEWVYMWDKFXXXXXXXXXXTSKAEQAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR 180
            IDTEWVYMWDKF          TSKAE+AQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR
Sbjct: 1222 IDTEWVYMWDKFGGYLLLLLGLTSKAERAQDEVRLRLFLDSIGFSDLSAKKIKKWMPEDR 1281

Query: 181  RQFEIIQESYIREK 194
            RQFEIIQESYIREK
Sbjct: 1282 RQFEIIQESYIREK 1295


>Glyma03g20620.1 
          Length = 208

 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 52/70 (74%), Gaps = 9/70 (12%)

Query: 11  KETVVQTIARSATKTRNALSGTYSAPQRSASSAALLIGDPTAMLDRAGNFVLPRADVMKL 70
           KETV+Q IARSATK         SAP+RSASSA  LI DPT + DR  NFVLPRA+VMKL
Sbjct: 87  KETVIQEIARSATK---------SAPKRSASSATHLIEDPTILCDRTRNFVLPRANVMKL 137

Query: 71  RDRLRNEELV 80
           RD LRNEEL+
Sbjct: 138 RDLLRNEELI 147