Miyakogusa Predicted Gene
- Lj0g3v0129439.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0129439.1 Non Chatacterized Hit- tr|Q01C82|Q01C82_OSTTA
3'-5' exonuclease, putative (ISS) OS=Ostreococcus taur,32.21,2e-18,no
description,NULL; 3-5 EXONUCLEASE,NULL; DNA_pol_A_exo1,3'-5'
exonuclease domain; 3'-5' exonucleas,CUFF.7831.1
(568 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g38330.1 920 0.0
Glyma10g28980.1 900 0.0
Glyma14g23840.1 84 4e-16
Glyma14g23840.2 84 5e-16
Glyma13g03400.1 80 8e-15
Glyma13g03400.2 79 9e-15
Glyma18g00520.2 74 4e-13
Glyma18g00520.1 73 8e-13
Glyma18g42030.1 67 4e-11
Glyma07g17310.1 64 5e-10
Glyma07g17250.1 61 4e-09
Glyma12g21130.1 59 1e-08
>Glyma20g38330.1
Length = 571
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/557 (79%), Positives = 492/557 (88%), Gaps = 2/557 (0%)
Query: 1 MGSEENVAETWNEEDSACKAWTLCKHTFNNLAHVSPVVFLFLVKQCYFYGTCKAGAKFRA 60
MG EENVA+T +D A + TLC H F +L HVSPVVFLFL+K+CY+YGTCKA AKFRA
Sbjct: 1 MGLEENVAKTSTTKDDASQMLTLCTHAFYDLTHVSPVVFLFLLKKCYYYGTCKATAKFRA 60
Query: 61 LQDQICLVLHNDPKPGPATFIVQCLYVSPLFEDNNSQGFTHLLVSALRHFLKRST-TSED 119
LQ Q+ LVLHNDPKPGPATFIVQC+YVSPLFED+ SQGFTHL++SALR FLKRST T+ED
Sbjct: 61 LQHQVHLVLHNDPKPGPATFIVQCMYVSPLFEDH-SQGFTHLIISALRRFLKRSTITTED 119
Query: 120 SLEMNYSAARLLLDIIRGQVHHDDKIVIKLLEMFDIELTNMEKAMCQIEEKDDLSCGMAK 179
SLE+ A LL+DIIRGQ+HHD+KIV+KLLE+FD++LTN+EKAMCQI+EK +LS G A
Sbjct: 120 SLEVKDLVAHLLVDIIRGQIHHDEKIVMKLLEIFDVKLTNVEKAMCQIKEKHELSYGTAN 179
Query: 180 EFVEQYIFKLVESKLYMSAVTLIESLSIRHYGQSFLLDMIKNNQFKPAEKWATFMGKPML 239
EFVEQYI +LV+S+ YM+AVTLIE SI YGQSFLLDMI++NQFK AEKWATFMGKPML
Sbjct: 180 EFVEQYIVELVKSQFYMTAVTLIEQFSIHQYGQSFLLDMIQSNQFKAAEKWATFMGKPML 239
Query: 240 SMLIEELLERNMLKNAYEIIKENNLNQDFPDVYKKCKERTLKSLAEKGCWDVAEERTNND 299
S L+EE +ERNMLKNAYEIIK+NNL QDFPDVYK+CKE +LK+LAEKGCWDVAE RTNND
Sbjct: 240 STLVEEFIERNMLKNAYEIIKKNNLKQDFPDVYKRCKESSLKNLAEKGCWDVAEARTNND 299
Query: 300 RQLMEYLVYLAMEAGYKEKVDELCDRYSLQNFWDIKVPETSILQGRYLHLDELMVEDIIW 359
RQLMEYLVYLA+EAGY EKVDELCDRY L F DIKVPETS LQGRYLHLDEL+V+ IIW
Sbjct: 300 RQLMEYLVYLALEAGYMEKVDELCDRYCLDRFLDIKVPETSNLQGRYLHLDELLVDSIIW 359
Query: 360 VDEVEGLIDATCHIEGVKIVGVDCEWKPNYVKGSKPNKVSIMQIATEKMAFIFDLIKLHR 419
VDEVEGL+DAT HI+G K++G+DCEWKPNYVKGSKPNKVSIMQIA+EKM FIFDLIKLH+
Sbjct: 360 VDEVEGLLDATRHIKGFKVIGLDCEWKPNYVKGSKPNKVSIMQIASEKMVFIFDLIKLHK 419
Query: 420 EVPDSLDDCLTRILLSSRILKLGYNFQCDIKQLASSYGELKCFKNYEMLLDIQNVFKEPR 479
EVPD LDDCL+ ILLS RILKLGYNFQCD KQLA SY EL+CFKNYEMLLDIQNVFKEPR
Sbjct: 420 EVPDILDDCLSCILLSPRILKLGYNFQCDAKQLAYSYEELRCFKNYEMLLDIQNVFKEPR 479
Query: 480 GGLAGLTEKILGARLNKTRRNSNWEQRPLTENQLEYAALDAVVLIHIFRHLPDQGHDKFG 539
GGLAGL EKILGA LNKTRRNSNWEQRPLT NQLEYAALDAVVL+HIF HLP QGHDK
Sbjct: 480 GGLAGLAEKILGASLNKTRRNSNWEQRPLTPNQLEYAALDAVVLVHIFHHLPGQGHDKSE 539
Query: 540 WKSCIMSHSENTKKSNK 556
WKSCI+SH+EN KK K
Sbjct: 540 WKSCIVSHTENAKKFKK 556
>Glyma10g28980.1
Length = 566
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/559 (77%), Positives = 491/559 (87%), Gaps = 4/559 (0%)
Query: 1 MGSEENVAETWNEEDSACKAWTLCKHTFNNLAHVSPVVFLFLVKQCYFYGTCKAGAKFRA 60
M +ENVA+T N ED+A + WTLCKH F +L HVSPVVFLFL+K+CY+YGTCKA KFRA
Sbjct: 1 MSLKENVAKTGNTEDNASQMWTLCKHAFYDLTHVSPVVFLFLLKECYYYGTCKASTKFRA 60
Query: 61 LQDQICLVLHNDPKPGPATFIVQCLYVSPLFEDNNSQGFTHLLVSALRHFLKRSTTS-ED 119
LQ Q+ LVL NDPKP PATFIVQC+YVSPLFED+ SQGFTHL++SALR FLKRSTT+ ED
Sbjct: 61 LQHQVHLVLSNDPKPEPATFIVQCMYVSPLFEDH-SQGFTHLIISALRRFLKRSTTTTED 119
Query: 120 SLEMNYSAARLLLDIIRGQVHHDDKIVIKLLEMFDIELTNMEKAMCQIEEKDDLSCGMAK 179
SLE+ A LL+DII GQ+ HD+KIV+KLLE+FD++LTN+EKAMCQI+EK DLSCG AK
Sbjct: 120 SLEVKDLVAHLLVDIIWGQIDHDEKIVLKLLEIFDVKLTNVEKAMCQIKEKHDLSCGTAK 179
Query: 180 EFVEQYIFKLVESKLYMSAVTLIESLSIRHYGQSFLLDMIKNNQFKPAEKWATFMGKPML 239
EFVEQYI +LV+S+LYM+AVTLIE S+ YGQSFLLDMI++NQFK AEKWATFMGK ML
Sbjct: 180 EFVEQYIVELVKSQLYMTAVTLIEQFSVYQYGQSFLLDMIQSNQFKAAEKWATFMGKQML 239
Query: 240 SMLIEELLERNMLKNAYEIIKENNLNQDFPDVYKKCKERTLKSLAEKGCWDVAEERTNND 299
S L+EE +ERNMLKNA+EIIK+NNL QDFPDVYK+CKE +LK+LAEKGCW+VAE R NND
Sbjct: 240 STLVEEFIERNMLKNAHEIIKKNNLKQDFPDVYKRCKESSLKNLAEKGCWEVAEARINND 299
Query: 300 RQLMEYLVYLAMEAGYKEKVDELCDRYSLQNFWDIKVPETSILQGRYLHLDELMVEDIIW 359
RQLMEYLVYLAMEAGY EKVDELCDRYSL F DI VPETS LQG YL+LDEL+VE IIW
Sbjct: 300 RQLMEYLVYLAMEAGYMEKVDELCDRYSLSRFLDINVPETSNLQGHYLNLDELLVESIIW 359
Query: 360 VDEVEGLIDATCHIEGVKIVGVDCEWKPNYVKGSKPNKVSIMQIATEKMAFIFDLIKLHR 419
VDEVEGL+DAT HIEG K++G+DCEWKPNY+KGSKPNKVSIMQIA+E AFIFDLIKLH+
Sbjct: 360 VDEVEGLLDATRHIEGFKVIGLDCEWKPNYIKGSKPNKVSIMQIASEDSAFIFDLIKLHK 419
Query: 420 EVPDSLDDCLTRILLSSRILKLGYNFQCDIKQLASSYGELKCFKNYEMLLDIQNVFKEPR 479
EVPD LD+CL+RILLS RILKLGYNFQCD KQLA SY EL+CFKNYEMLLDIQNVFKEPR
Sbjct: 420 EVPDILDNCLSRILLSPRILKLGYNFQCDAKQLAYSYEELRCFKNYEMLLDIQNVFKEPR 479
Query: 480 GGLAGLTEKILGARLNKTRRNSNWEQRPLTENQLEYAALDAVVLIHIFRHLPDQGH--DK 537
GGLAGLTEKILGA LNKTRRNSNWEQRPLT +QLEYAALDAVVL+HIFRHLP QGH DK
Sbjct: 480 GGLAGLTEKILGASLNKTRRNSNWEQRPLTPHQLEYAALDAVVLVHIFRHLPCQGHNKDK 539
Query: 538 FGWKSCIMSHSENTKKSNK 556
WKSCI+S +EN KK K
Sbjct: 540 SEWKSCIVSLTENAKKFKK 558
>Glyma14g23840.1
Length = 478
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 15/160 (9%)
Query: 378 IVGVDCEWKPNYVKGSKPNKVSIMQIATEKMAFIFDLIKLHREVPDSLDDCLTRILLSSR 437
+VG+D EWKP V+ S P +V+++QIA A ++ L SL D L +LLS
Sbjct: 34 VVGLDAEWKP--VRRSFP-RVAVLQIACGDSAVF--VLDLLSLPLSSLWDPLRELLLSPD 88
Query: 438 ILKLGYNFQCDIKQLASSYGELKCFKNYEMLLDIQNVFKE--------PR--GGLAGLTE 487
ILKLG+ F+ D+ L+S++ F E LDI++V+ P+ L+ +
Sbjct: 89 ILKLGFGFKQDLVYLSSTFASHGGFDKVEPYLDIKSVYNHLQHNKKHVPKQSKSLSTICT 148
Query: 488 KILGARLNKTRRNSNWEQRPLTENQLEYAALDAVVLIHIF 527
++LG L+K + S+W RPLTE Q+ YAA+DA L+ IF
Sbjct: 149 EVLGFSLSKELQCSDWSYRPLTEEQITYAAMDAHCLLDIF 188
>Glyma14g23840.2
Length = 468
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 15/160 (9%)
Query: 378 IVGVDCEWKPNYVKGSKPNKVSIMQIATEKMAFIFDLIKLHREVPDSLDDCLTRILLSSR 437
+VG+D EWKP V+ S P +V+++QIA A ++ L SL D L +LLS
Sbjct: 34 VVGLDAEWKP--VRRSFP-RVAVLQIACGDSAVF--VLDLLSLPLSSLWDPLRELLLSPD 88
Query: 438 ILKLGYNFQCDIKQLASSYGELKCFKNYEMLLDIQNVFKE--------PR--GGLAGLTE 487
ILKLG+ F+ D+ L+S++ F E LDI++V+ P+ L+ +
Sbjct: 89 ILKLGFGFKQDLVYLSSTFASHGGFDKVEPYLDIKSVYNHLQHNKKHVPKQSKSLSTICT 148
Query: 488 KILGARLNKTRRNSNWEQRPLTENQLEYAALDAVVLIHIF 527
++LG L+K + S+W RPLTE Q+ YAA+DA L+ IF
Sbjct: 149 EVLGFSLSKELQCSDWSYRPLTEEQITYAAMDAHCLLDIF 188
>Glyma13g03400.1
Length = 506
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 15/160 (9%)
Query: 378 IVGVDCEWKPNYVKGSKPNKVSIMQIATEKMAFIFDLIKLHREVPDSLDDCLTRILLSSR 437
+VG+D EWKP V+ P +V+++QIA A +F L L + L +LLS
Sbjct: 35 VVGLDAEWKP--VRRLFP-RVAVLQIACGDSA-VFLLDLLSLPLSSLWAP-LRELLLSPD 89
Query: 438 ILKLGYNFQCDIKQLASSYGELKCFKNYEMLLDIQNVFKE--------PR--GGLAGLTE 487
ILKLG+ F+ D+ L+S++ F E LDI++V+ P+ L+ +
Sbjct: 90 ILKLGFGFKQDLVYLSSTFASHGGFDKVEPYLDIKSVYNHLQHNKKHVPKQSKSLSTICA 149
Query: 488 KILGARLNKTRRNSNWEQRPLTENQLEYAALDAVVLIHIF 527
++LG L+K + S+W RPLTE Q+ YAA+DA L+ IF
Sbjct: 150 EVLGFSLSKELQCSDWSHRPLTEEQITYAAMDAHCLLDIF 189
>Glyma13g03400.2
Length = 375
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 15/160 (9%)
Query: 378 IVGVDCEWKPNYVKGSKPNKVSIMQIATEKMAFIFDLIKLHREVPDSLDDCLTRILLSSR 437
+VG+D EWKP V+ P +V+++QIA A +F L L + L +LLS
Sbjct: 35 VVGLDAEWKP--VRRLFP-RVAVLQIACGDSA-VFLLDLLSLPLSSLWAP-LRELLLSPD 89
Query: 438 ILKLGYNFQCDIKQLASSYGELKCFKNYEMLLDIQNVFKE--------PR--GGLAGLTE 487
ILKLG+ F+ D+ L+S++ F E LDI++V+ P+ L+ +
Sbjct: 90 ILKLGFGFKQDLVYLSSTFASHGGFDKVEPYLDIKSVYNHLQHNKKHVPKQSKSLSTICA 149
Query: 488 KILGARLNKTRRNSNWEQRPLTENQLEYAALDAVVLIHIF 527
++LG L+K + S+W RPLTE Q+ YAA+DA L+ IF
Sbjct: 150 EVLGFSLSKELQCSDWSHRPLTEEQITYAAMDAHCLLDIF 189
>Glyma18g00520.2
Length = 214
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 30/169 (17%)
Query: 379 VGVDCEWKPNYVKGSKPNKVSIMQIATE-KMAFIFDLIKLHREVPDSLDDCLTRILLSSR 437
+G D EWKP + KG P KV++MQI + + + LI H +P +L +L
Sbjct: 44 IGFDIEWKPTFRKGVPPGKVAVMQICGDTRHCHVLHLI--HSGIPQNLQ----LLLEDPT 97
Query: 438 ILKLGYNFQCDIKQLASSYGELKCFKNYEM----LLDI-----QNVFKEPRGGLAGLTEK 488
+LK+G D +K F++Y + + D+ Q + + + GLA LTEK
Sbjct: 98 VLKVGAGIDGD---------AVKVFRDYNISVKGVTDLSFHANQKLGGDHKWGLASLTEK 148
Query: 489 ILGARLNKTR--RNSNWEQRPLTENQLEYAALDAVV---LIHIFRHLPD 532
+L +L K R NWE L++ QLEYAA DA L + LPD
Sbjct: 149 LLSKQLKKPNKIRLGNWEAPVLSKEQLEYAATDAFASWCLYQAIKDLPD 197
>Glyma18g00520.1
Length = 292
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 30/169 (17%)
Query: 379 VGVDCEWKPNYVKGSKPNKVSIMQIATE-KMAFIFDLIKLHREVPDSLDDCLTRILLSSR 437
+G D EWKP + KG P KV++MQI + + + LI H +P +L +L
Sbjct: 122 IGFDIEWKPTFRKGVPPGKVAVMQICGDTRHCHVLHLI--HSGIPQNLQ----LLLEDPT 175
Query: 438 ILKLGYNFQCDIKQLASSYGELKCFKNYEM----LLDI-----QNVFKEPRGGLAGLTEK 488
+LK+G D +K F++Y + + D+ Q + + + GLA LTEK
Sbjct: 176 VLKVGAGIDGDA---------VKVFRDYNISVKGVTDLSFHANQKLGGDHKWGLASLTEK 226
Query: 489 ILGARLNKTR--RNSNWEQRPLTENQLEYAALDAVV---LIHIFRHLPD 532
+L +L K R NWE L++ QLEYAA DA L + LPD
Sbjct: 227 LLSKQLKKPNKIRLGNWEAPVLSKEQLEYAATDAFASWCLYQAIKDLPD 275
>Glyma18g42030.1
Length = 162
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 378 IVGVDCEWKPNYVKGSKPNKVSIMQIATEKMAFIFDLIKLHREVPDSLDDCLTRILLSSR 437
+VG+D EW+PNY ++PN V+ +Q+ T IF +I S+ L L +
Sbjct: 1 MVGLDVEWRPNYQPNTQPNPVATLQLCTGHRCLIFQIIH-----APSIPAALISFLANPN 55
Query: 438 ILKLGYNFQCDIKQLASSYGELKCFKNYEMLLDIQNVFKE-----PRGGLAGLTEKILGA 492
I G + D ++L Y L ++ + + + GLA L +LG
Sbjct: 56 ITFFGVGIRADAEKLLVDYNLHVANVRDLRPLAVERLSRAFYPDVSQAGLATLARHVLGV 115
Query: 493 RLNKTR--RNSNWEQRPLTENQLEYAALDAVVLIHIFRHLPD 532
+ K + S W+ R LT+ Q++YA +DA + I R L D
Sbjct: 116 AVEKPQWITRSRWDDRRLTKEQVQYATIDAFLSYEIGRQLND 157
>Glyma07g17310.1
Length = 203
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 378 IVGVDCEWKPNYVKGSKP-NKVSIMQIATEKMAFIFDLIKLHREVPDSLDDCLTRILLSS 436
IVG+D EWKPN +P N V+ +Q+ IF ++ +P +L L +
Sbjct: 49 IVGLDVEWKPNTRPNMQPPNPVATLQLCIGHNCLIFQILYAPL-IPRALSSFLN----NP 103
Query: 437 RILKLGYNFQCDIKQLASSY-------GELKCFKNYEMLLDIQNVFKEPRGGLAGLTEKI 489
++ +G Q D +L Y GEL+ E+ VF+ GLA L +
Sbjct: 104 DVIFVGVGIQEDADKLLRDYNLRVTNVGELRSLAAEEL-----QVFQLQWAGLAALGHYV 158
Query: 490 LGARLNKTRR--NSNWEQRPLTENQLEYAALDAVVLIHIFRHLPD 532
LG ++K S W+ R LT+ Q+ YAA+DA V I R L D
Sbjct: 159 LGFEIDKPENVTMSRWDNRYLTDEQVAYAAIDAFVSGEIGRALID 203
>Glyma07g17250.1
Length = 238
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 372 HIEGVKIVGVDCEWKPNYVKGSKPNKVSIMQIATEKMAFIFDLIKLHREVPDSLDDCLTR 431
H + V VG+D EW+PN + + N V+ +Q+ + +F + LH S+ L
Sbjct: 78 HQQRVLTVGLDIEWRPNTQRNMQ-NPVATLQLCVAERCLVFQI--LHSP---SIPPSLVS 131
Query: 432 ILLSSRILKLGYNFQCDIKQLASSYG-------ELKCFKNYEMLLDIQNVFKEPRGGLAG 484
L I +G Q D+++L Y +L+ F E L D++ K R GL
Sbjct: 132 FLADPNITFVGVGIQEDMEKLLEDYNLNVANVRDLRSFA-AERLGDLE--LK--RAGLKS 186
Query: 485 LTEKILGARLNKTRR--NSNWEQRPLTENQLEYAALDAVVLIHIFRHL 530
L ++LG + K +R S W+ LT Q++YAA+DA + I R L
Sbjct: 187 LGLRVLGLEVAKPKRVTRSRWDNPWLTAQQVQYAAVDAFLSYEIDRRL 234
>Glyma12g21130.1
Length = 208
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 337 PETSILQGRYLHLDELMVEDIIWVDEVEGLID------ATCHIEGVKIVGVDCEWKPNYV 390
P TS+ + D L +E I + G++D ++ + +IVG+D EW
Sbjct: 15 PSTSMY---LVSCDGLTIETTI--TDKSGIVDKWIQVVSSTYAGKQRIVGLDTEW----T 65
Query: 391 KGSKPN-KVSIMQIATEKMAFIFDLIKLHREVPDSLDDCLTRILLSSRILKLGYNFQCDI 449
KP KV+I+Q+ E I L + D++ L L+ S +G D+
Sbjct: 66 TAKKPKMKVAILQLCIENKCLIIQLFHM-----DNIPQSLRSFLMDSNFEFVGVGVINDL 120
Query: 450 KQLASSYGELKCFKNYEMLLDIQNVFKE------PRGGLAGLTEKILGARLNKTRR--NS 501
+ L + YG L+C K +D+ + KE G L L ++++G + K++ S
Sbjct: 121 RMLKNDYG-LECNKG----IDVSLLAKEKWPHRISSGALKYLAKELVGLEMEKSKAVCTS 175
Query: 502 NWEQRPLTENQLEYAALDAVVLIHIFRHLPDQ 533
W+ + LT+ Q+EYA +DA I + + +Q
Sbjct: 176 EWQSKELTQTQIEYACIDAYASFKIGKMILNQ 207