Miyakogusa Predicted Gene

Lj0g3v0129049.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0129049.1 tr|F6UJ99|F6UJ99_MOUSE Symplekin (Fragment)
OS=Mus musculus GN=Sympk PE=4 SV=1,50,2e-19,Symplekin_C,Symplekin
C-terminal; SYMPLEKIN,NULL; FAMILY NOT NAMED,NULL,CUFF.7795.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g07790.1                                                       211   1e-55
Glyma01g30320.1                                                       209   7e-55
Glyma04g09480.1                                                       140   3e-34
Glyma06g09580.1                                                       127   4e-30

>Glyma03g07790.1 
          Length = 1350

 Score =  211 bits (538), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/159 (73%), Positives = 127/159 (79%), Gaps = 20/159 (12%)

Query: 1    MRTVLQAIGAFPTLVDFIMEILSRLVKKQIWKYPKLWVGFLKCVQLTKPQSLGVLLQLPI 60
            MRTVLQAIGAFPTLVDFIM ILSRLV KQIWKYPKLWVGFLKCVQLTKPQS G+LLQLP 
Sbjct: 1192 MRTVLQAIGAFPTLVDFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFGILLQLPP 1251

Query: 61   AQLENALNRIAALKAPLIAHATQPEVQSTLPRSVLVLLGIVSDAQI-------------- 106
            AQLENALNRIAALKAPLIAHA+QP++QS LPR+VLV+LG+ SD+Q+              
Sbjct: 1252 AQLENALNRIAALKAPLIAHASQPDIQSKLPRAVLVVLGLASDSQVSSQAQTSQTQTSQT 1311

Query: 107  ------SNQAQTSQTQTDETSLSDKDTVTEKSKESSIAS 139
                  + Q QTSQTQT ETS SDKDT TEKSKESS AS
Sbjct: 1312 QTSQTQTTQTQTSQTQTGETSSSDKDTATEKSKESSTAS 1350


>Glyma01g30320.1 
          Length = 1546

 Score =  209 bits (532), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 116/164 (70%), Positives = 127/164 (77%), Gaps = 25/164 (15%)

Query: 1    MRTVLQAIGAFPTLVDFIMEILSRLVKKQIWKYPKLWVGFLKCVQLTKPQSLGVLLQLPI 60
            MRTVLQAIGAFPTLVDFIM ILSRLV KQIWKYPKLWVGFLKCVQLTKPQS G+LLQLP 
Sbjct: 1383 MRTVLQAIGAFPTLVDFIMGILSRLVMKQIWKYPKLWVGFLKCVQLTKPQSFGILLQLPP 1442

Query: 61   AQLENALNRIAALKAPLIAHATQPEVQSTLPRSVLVLLGIVSDAQISNQA---------- 110
            AQLEN LNRIAALKAPLIAHA+QP++QS LPR++LV+LG+ SD+Q+ +QA          
Sbjct: 1443 AQLENTLNRIAALKAPLIAHASQPDIQSKLPRAMLVVLGLASDSQVLSQAQTTQTQTSQT 1502

Query: 111  ---------------QTSQTQTDETSLSDKDTVTEKSKESSIAS 139
                           QTSQTQT ETS SDKDT TEKSKESS AS
Sbjct: 1503 QTSQTQTTQTQTSQTQTSQTQTGETSNSDKDTATEKSKESSTAS 1546


>Glyma04g09480.1 
          Length = 947

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 64/105 (60%), Positives = 84/105 (80%)

Query: 1   MRTVLQAIGAFPTLVDFIMEILSRLVKKQIWKYPKLWVGFLKCVQLTKPQSLGVLLQLPI 60
           MRTV+QAI AFP +VDF+MEILS+LV +Q+W+ PKLWVGFLKCV  T+P+S  VLLQLP 
Sbjct: 820 MRTVIQAIDAFPAMVDFVMEILSKLVSRQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPP 879

Query: 61  AQLENALNRIAALKAPLIAHATQPEVQSTLPRSVLVLLGIVSDAQ 105
            QLE+ALNR A L+ PL ++A+QP V+S+L RS L +LG+ ++  
Sbjct: 880 QQLESALNRHANLRGPLASYASQPTVKSSLSRSTLAVLGLANETH 924


>Glyma06g09580.1 
          Length = 871

 Score =  127 bits (318), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 57/84 (67%), Positives = 70/84 (83%)

Query: 1   MRTVLQAIGAFPTLVDFIMEILSRLVKKQIWKYPKLWVGFLKCVQLTKPQSLGVLLQLPI 60
           MRTV+QAI AFP LVDF+MEILS+LV +Q+W+ PKLWVGFLKCV  T+P+S  VLLQLP 
Sbjct: 787 MRTVIQAIDAFPALVDFVMEILSKLVSRQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPP 846

Query: 61  AQLENALNRIAALKAPLIAHATQP 84
            QLE+ALNR A L+ PL ++A+QP
Sbjct: 847 QQLESALNRHANLRGPLASYASQP 870