Miyakogusa Predicted Gene

Lj0g3v0128989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128989.1 tr|G7JIY5|G7JIY5_MEDTR L-lactate dehydrogenase
OS=Medicago truncatula GN=MTR_4g101130 PE=3 SV=1,90.16,0,LDH
C-terminal domain-like,Lactate dehydrogenase/glycoside hydrolase,
family 4, C-terminal; no descr,CUFF.7793.1
         (122 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g41920.1                                                       207   2e-54
Glyma05g04520.1                                                       205   1e-53
Glyma17g14950.1                                                       196   7e-51

>Glyma01g41920.1 
          Length = 352

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 100/122 (81%), Positives = 111/122 (90%)

Query: 1   MSFLEKQQIAVEKETLENIHRTVIESAYEVISLKGYTSWAIGYSVASLARSILRDQRKID 60
           +SFLEKQ+IA EKE LENIH+ VI+ AYEVI+LKGYTSWAIGYSVA+LAR+ILRDQR++ 
Sbjct: 231 LSFLEKQEIAYEKEMLENIHKEVIQGAYEVINLKGYTSWAIGYSVANLARTILRDQRRVH 290

Query: 61  PVSVLAKGFYGIGDAEVFLSLPAQLGRGGVLGVTNVHLNEEEEQRLRDSAKAILEVQSQL 120
           PVSVLAKGFYGI D EVFLSLPAQLGRGGVLGVTNVHL EEE QRLRDSAK IL+VQ+QL
Sbjct: 291 PVSVLAKGFYGIDDGEVFLSLPAQLGRGGVLGVTNVHLTEEETQRLRDSAKTILQVQNQL 350

Query: 121 EI 122
            I
Sbjct: 351 VI 352


>Glyma05g04520.1 
          Length = 349

 Score =  205 bits (521), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 100/122 (81%), Positives = 110/122 (90%), Gaps = 1/122 (0%)

Query: 1   MSFLEKQQIAVEKETLENIHRTVIESAYEVISLKGYTSWAIGYSVASLARSILRDQRKID 60
           +SFLE QQI  EKETLENIH++VI+SAYEVI LKGYTSWAIGYSVA+LARS +R+QRKI 
Sbjct: 229 LSFLENQQIVYEKETLENIHKSVIDSAYEVIKLKGYTSWAIGYSVANLARSFIRNQRKIH 288

Query: 61  PVSVLAKGFYGIGDAEVFLSLPAQLGRGGVLGVTNVHLNEEEEQRLRDSAKAILEVQSQL 120
           PVSVLAKGFYGI D EVFLSLPA +GRGG+LGVTNVHLNEEE QRLRDSAK ILEVQ+QL
Sbjct: 289 PVSVLAKGFYGI-DGEVFLSLPAMIGRGGILGVTNVHLNEEETQRLRDSAKTILEVQTQL 347

Query: 121 EI 122
            I
Sbjct: 348 GI 349


>Glyma17g14950.1 
          Length = 349

 Score =  196 bits (497), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 97/122 (79%), Positives = 106/122 (86%), Gaps = 1/122 (0%)

Query: 1   MSFLEKQQIAVEKETLENIHRTVIESAYEVISLKGYTSWAIGYSVASLARSILRDQRKID 60
           +SFLE Q I  EKETLENIH++VI+ AYEVI LKGYTSWAIGYSVA+LARS +RDQRKI 
Sbjct: 229 LSFLESQHIGYEKETLENIHKSVIDGAYEVIRLKGYTSWAIGYSVANLARSFIRDQRKIH 288

Query: 61  PVSVLAKGFYGIGDAEVFLSLPAQLGRGGVLGVTNVHLNEEEEQRLRDSAKAILEVQSQL 120
           PVSVLAKGFYGI D EVFLSLPA +GRGGVL VTNVHLNEEE QRL+DSAK I EVQ+QL
Sbjct: 289 PVSVLAKGFYGI-DGEVFLSLPALVGRGGVLSVTNVHLNEEETQRLKDSAKTIHEVQTQL 347

Query: 121 EI 122
            I
Sbjct: 348 GI 349