Miyakogusa Predicted Gene

Lj0g3v0128909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128909.1 Non Chatacterized Hit- tr|I1KMT9|I1KMT9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,37.83,4e-18,seg,NULL,CUFF.7780.1
         (200 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g15400.1                                                       117   9e-27
Glyma09g04370.1                                                        89   3e-18
Glyma07g37140.1                                                        82   4e-16

>Glyma15g15400.1 
          Length = 295

 Score =  117 bits (293), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 118/210 (56%), Gaps = 47/210 (22%)

Query: 1   MRSLNDQQSLPPIDM---NVATKSKRRGGGTRSKLPMEDENNMMAVSLSQNSLETIPKRK 57
           MRSLN  +SLPP DM   N AT SKRR  G+R+K   E+E NM   +LSQNS E++P   
Sbjct: 120 MRSLN--ESLPPTDMAAVNSAT-SKRRVRGSRNKPATEEEKNM---ALSQNSFESMPS-- 171

Query: 58  AAIFNRGEGDQVSMILDACDQMQQGNINSTAAASYNASVNGDHIEGFGLGPYH----DEI 113
               NR EG+++SM +DAC +M+   I+ST A+  +   +        LGPYH    DEI
Sbjct: 172 ---CNREEGEEISM-MDACYEMESITISSTFASCPSLEAS--------LGPYHHWSDDEI 219

Query: 114 MKLGHMFENXXXXXXXXXXXXXXWHTTPTSGCLSV----NSISTTDFQCFDWDLQGTVQS 169
           MKL +MFEN                  P+   +++    N I        DWD+ G+VQS
Sbjct: 220 MKLSNMFENGVL-------------VNPSGNNVTLKDEPNGIECGQMNWSDWDMGGSVQS 266

Query: 170 HNEWDLYEEQDQVVTGLWGTGIGEIN-GFH 198
           +N+W+L +  DQV+  LW TGIGEIN GFH
Sbjct: 267 NNQWNLCD--DQVMNCLWSTGIGEINYGFH 294


>Glyma09g04370.1 
          Length = 311

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 103/206 (50%), Gaps = 58/206 (28%)

Query: 30  SKLPMEDENNMMAVSLSQNSLETIPKRKAAIFNRGEGDQVSMILDACDQMQQGNINSTAA 89
           +K   E+E N   ++LSQNS E++P       NR EG+++SM +DAC +M+ G   S+ A
Sbjct: 126 NKPTTEEEKN---IALSQNSFESMPS-----CNREEGEEISM-MDACYEME-GITVSSKA 175

Query: 90  ASYNASVNGDHIEGFGLGPYH----DEIMKLGHMFENXXXXX------------------ 127
           ASY +  +        LGPYH    DEIMKL +MFEN                       
Sbjct: 176 ASYPSLEDS-------LGPYHHWSDDEIMKLSNMFENGVLVNPCGNDLTLKEEPNGNECG 228

Query: 128 --------XXXXXXXXXWHTTP------TSGCLSVNSISTTDFQCFDWDLQGTVQSHNEW 173
                            W+++          C SVNS+   D+Q  DWD+ G+VQS+N+W
Sbjct: 229 QMNVDVMGTDQSKNNGVWNSSNGESGEWYPNCSSVNSV--IDYQWSDWDMGGSVQSNNQW 286

Query: 174 DLYEEQDQVVTGLWGTGIGEIN-GFH 198
           +L +  DQV+  LW TGIGEIN GFH
Sbjct: 287 NLCD--DQVMNCLWSTGIGEINYGFH 310


>Glyma07g37140.1 
          Length = 314

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 101/230 (43%), Gaps = 66/230 (28%)

Query: 1   MRSLNDQQSLPPIDM---NVATKSKRRGGGTRSKLPMEDENNMMAVSLSQNSLETIPKRK 57
           M+SLN  +SLPPIDM   NVA KSKRR GG     PM   +   A S S N  E++    
Sbjct: 120 MKSLN--ESLPPIDMAAVNVAAKSKRRTGGRVQ--PMLKRS---ATSQSFNDEESL---- 168

Query: 58  AAIFNRGEGDQVSMILDACDQMQQGNINSTAAASYNASVNGDHIEGFGLGPYH---DEIM 114
                          LDA  +M     ++TA+     S+  D +E   LGPY    DEIM
Sbjct: 169 -----------TDYGLDAYCEMGDNTYDTTASC---PSI--DEVEA--LGPYQWLDDEIM 210

Query: 115 KLGHMFENXXXXXX----------------------XXXXXXXXWHTTPTSGCLSVNSIS 152
           KL  MFEN                                    W+T+    C SVNS+ 
Sbjct: 211 KLTRMFENGVLVNPGGVLTNNEEWLIRNNFGLMGEGSSNAESGEWNTS----CSSVNSV- 265

Query: 153 TTDFQCFDW---DLQGTVQSHNEWDLYEEQDQVVTGLWGTGIGEINGFHQ 199
             D+  + W    L+G+VQS+N WDL EE   V    WGTG  E NGF+Q
Sbjct: 266 -YDYHHYQWPDMQLEGSVQSYNPWDLCEENQNVANCFWGTGHNEGNGFYQ 314