Miyakogusa Predicted Gene

Lj0g3v0128869.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128869.2 Non Chatacterized Hit- tr|K4CTX1|K4CTX1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,32.98,9e-17,
,CUFF.7777.2
         (181 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g30400.1                                                       165   2e-41
Glyma16g07390.1                                                        81   6e-16

>Glyma19g30400.1 
          Length = 728

 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 102/142 (71%), Gaps = 1/142 (0%)

Query: 1   MAQRYRRV-KEISRVLAPILQPGDCYQQSGRALKSVALSIMCMASGQKPFPNATQLRGFH 59
           MA R+RR+ K++S+ L P+L  G+C QQS +AL  VALSIM M S Q P  N TQ+RGF 
Sbjct: 1   MALRHRRLTKQLSKFLTPVLNAGNCCQQSSKALNLVALSIMHMPSAQSPIANWTQVRGFR 60

Query: 60  VHRFSTMVDVSREPATKIDLLSFIKASLNEFEGTHHYWLNQSGKCKQIFEGDGIFLVLAA 119
            +R ST  D   EPAT+IDLLSFIKASL+EFEGTHHYWLN+S    Q+F  DGIFLVL+A
Sbjct: 61  EYRISTKSDELCEPATEIDLLSFIKASLDEFEGTHHYWLNRSDNNDQLFGADGIFLVLSA 120

Query: 120 RNFESGNMFQKLKMVQKRFPHI 141
           R F+ G   +KLK +QKR   I
Sbjct: 121 RVFDCGIKLEKLKTIQKRHTEI 142


>Glyma16g07390.1 
          Length = 90

 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 46/55 (83%), Gaps = 1/55 (1%)

Query: 127 MFQKLKMVQKRFPHINIMGLKVIHSSAERVHLIQFLMTENITFPILLSERTFPQV 181
           M +KLK +QK FPHINIMGLK IHSS ++VHLIQ LMTENITFPILLS +  P++
Sbjct: 1   MLEKLKTIQKSFPHINIMGLKAIHSS-DQVHLIQLLMTENITFPILLSRQKTPKI 54