Miyakogusa Predicted Gene

Lj0g3v0128599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128599.1 Non Chatacterized Hit- tr|D7MH08|D7MH08_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,34.76,1e-17,Nucleic acid-binding proteins,Nucleic acid-binding,
OB-fold-like; N-terminal, heterodimerisation dom,CUFF.7776.1
         (180 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g34690.1                                                       320   4e-88
Glyma20g34690.3                                                       319   9e-88
Glyma20g34690.2                                                       319   9e-88
Glyma08g09000.1                                                        80   9e-16
Glyma05g26040.7                                                        80   9e-16
Glyma05g26040.6                                                        80   9e-16
Glyma05g26040.5                                                        80   9e-16
Glyma05g26040.1                                                        75   4e-14
Glyma05g26040.4                                                        64   1e-10
Glyma05g26040.3                                                        62   4e-10
Glyma05g26040.2                                                        50   9e-07

>Glyma20g34690.1 
          Length = 198

 Score =  320 bits (821), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 151/180 (83%), Positives = 164/180 (91%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MFLKVQL WNVIIAAENLQ   LML RAI++RLL DFA K+ATKDLGYF AVTTL+K+GE
Sbjct: 19  MFLKVQLHWNVIIAAENLQPEGLMLHRAIIVRLLSDFAVKKATKDLGYFLAVTTLEKIGE 78

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
           GKVRQHTGDVLFPVVFN +TFK FKGEILEGVVHKVLKHGVF+RCGPIE+VYLSN+KM D
Sbjct: 79  GKVRQHTGDVLFPVVFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMPD 138

Query: 121 YRYFPGENAYFMNEKASKIAKDVTIRFVVIGTKWMEAEREFQALVSLEGDYLGPIASPDI 180
           YRY PGENA FMN+K SKI KDVT+RF VIGTKWMEAEREFQALVSLEGDYLGPI++PDI
Sbjct: 139 YRYVPGENACFMNDKMSKIGKDVTVRFSVIGTKWMEAEREFQALVSLEGDYLGPISTPDI 198


>Glyma20g34690.3 
          Length = 180

 Score =  319 bits (818), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 151/180 (83%), Positives = 164/180 (91%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MFLKVQL WNVIIAAENLQ   LML RAI++RLL DFA K+ATKDLGYF AVTTL+K+GE
Sbjct: 1   MFLKVQLHWNVIIAAENLQPEGLMLHRAIIVRLLSDFAVKKATKDLGYFLAVTTLEKIGE 60

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
           GKVRQHTGDVLFPVVFN +TFK FKGEILEGVVHKVLKHGVF+RCGPIE+VYLSN+KM D
Sbjct: 61  GKVRQHTGDVLFPVVFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMPD 120

Query: 121 YRYFPGENAYFMNEKASKIAKDVTIRFVVIGTKWMEAEREFQALVSLEGDYLGPIASPDI 180
           YRY PGENA FMN+K SKI KDVT+RF VIGTKWMEAEREFQALVSLEGDYLGPI++PDI
Sbjct: 121 YRYVPGENACFMNDKMSKIGKDVTVRFSVIGTKWMEAEREFQALVSLEGDYLGPISTPDI 180


>Glyma20g34690.2 
          Length = 180

 Score =  319 bits (818), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 151/180 (83%), Positives = 164/180 (91%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MFLKVQL WNVIIAAENLQ   LML RAI++RLL DFA K+ATKDLGYF AVTTL+K+GE
Sbjct: 1   MFLKVQLHWNVIIAAENLQPEGLMLHRAIIVRLLSDFAVKKATKDLGYFLAVTTLEKIGE 60

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
           GKVRQHTGDVLFPVVFN +TFK FKGEILEGVVHKVLKHGVF+RCGPIE+VYLSN+KM D
Sbjct: 61  GKVRQHTGDVLFPVVFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMPD 120

Query: 121 YRYFPGENAYFMNEKASKIAKDVTIRFVVIGTKWMEAEREFQALVSLEGDYLGPIASPDI 180
           YRY PGENA FMN+K SKI KDVT+RF VIGTKWMEAEREFQALVSLEGDYLGPI++PDI
Sbjct: 121 YRYVPGENACFMNDKMSKIGKDVTVRFSVIGTKWMEAEREFQALVSLEGDYLGPISTPDI 180


>Glyma08g09000.1 
          Length = 176

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 9/180 (5%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MF  + L  N+ +      +    L+  ++ +L+ D     + +  G+  AVT ++ +G+
Sbjct: 1   MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGK 56

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
           G +R  TG V FPV +  V F+ FKGEILE VV  V K G F   GP++ +++SN  + D
Sbjct: 57  GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 115

Query: 121 YRYFPGENA--YFMNEKASKIAKDVTIRFVVIGTKWMEAEREFQALVSLEGDYLGPIASP 178
              F   +   Y  ++ + KI KD  +R  +IGT+ ++A   F  + +++ D+LG I  P
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR-VDATEIF-CIGTIKDDFLGVINDP 173


>Glyma05g26040.7 
          Length = 176

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 9/180 (5%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MF  + L  N+ +      +    L+  ++ +L+ D     + +  G+  AVT ++ +G+
Sbjct: 1   MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGK 56

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
           G +R  TG V FPV +  V F+ FKGEILE VV  V K G F   GP++ +++SN  + D
Sbjct: 57  GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 115

Query: 121 YRYFPGENA--YFMNEKASKIAKDVTIRFVVIGTKWMEAEREFQALVSLEGDYLGPIASP 178
              F   +   Y  ++ + KI KD  +R  +IGT+ ++A   F  + +++ D+LG I  P
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR-VDATEIF-CIGTIKDDFLGVINDP 173


>Glyma05g26040.6 
          Length = 176

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 9/180 (5%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MF  + L  N+ +      +    L+  ++ +L+ D     + +  G+  AVT ++ +G+
Sbjct: 1   MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGK 56

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
           G +R  TG V FPV +  V F+ FKGEILE VV  V K G F   GP++ +++SN  + D
Sbjct: 57  GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 115

Query: 121 YRYFPGENA--YFMNEKASKIAKDVTIRFVVIGTKWMEAEREFQALVSLEGDYLGPIASP 178
              F   +   Y  ++ + KI KD  +R  +IGT+ ++A   F  + +++ D+LG I  P
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR-VDATEIF-CIGTIKDDFLGVINDP 173


>Glyma05g26040.5 
          Length = 176

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 9/180 (5%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MF  + L  N+ +      +    L+  ++ +L+ D     + +  G+  AVT ++ +G+
Sbjct: 1   MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGK 56

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
           G +R  TG V FPV +  V F+ FKGEILE VV  V K G F   GP++ +++SN  + D
Sbjct: 57  GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 115

Query: 121 YRYFPGENA--YFMNEKASKIAKDVTIRFVVIGTKWMEAEREFQALVSLEGDYLGPIASP 178
              F   +   Y  ++ + KI KD  +R  +IGT+ ++A   F  + +++ D+LG I  P
Sbjct: 116 DMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTR-VDATEIF-CIGTIKDDFLGVINDP 173


>Glyma05g26040.1 
          Length = 217

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 47  GYFTAVTTLDKVGEGKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCG 106
           G+  AVT ++ +G+G +R  TG V FPV +  V F+ FKGEILE VV  V K G F   G
Sbjct: 43  GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 102

Query: 107 PIEHVYLSNMKMADYRYFPGENA--YFMNEKASKIAKDVTIRFVVIGTKWMEAE 158
           P++ +++SN  + D   F   +   Y  ++ + KI KD  +R  +IGT+    E
Sbjct: 103 PVQ-IFVSNHLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATE 155


>Glyma05g26040.4 
          Length = 140

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 5/120 (4%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MF  + L  N+ +      +    L+  ++ +L+ D     + +  G+  AVT ++ +G+
Sbjct: 1   MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGK 56

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSNMKMAD 120
           G +R  TG V FPV +  V F+ FKGEILE VV  V K G F   GP++ +++SN  + D
Sbjct: 57  GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 115


>Glyma05g26040.3 
          Length = 117

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 5/115 (4%)

Query: 1   MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
           MF  + L  N+ +      +    L+  ++ +L+ D     + +  G+  AVT ++ +G+
Sbjct: 1   MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGK 56

Query: 61  GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLKHGVFLRCGPIEHVYLSN 115
           G +R  TG V FPV +  V F+ FKGEILE VV  V K G F   GP++ +++SN
Sbjct: 57  GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSN 110


>Glyma05g26040.2 
          Length = 105

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 1  MFLKVQLSWNVIIAAENLQQGSLMLQRAILIRLLGDFAAKRATKDLGYFTAVTTLDKVGE 60
          MF  + L  N+ +      +    L+  ++ +L+ D     + +  G+  AVT ++ +G+
Sbjct: 1  MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGK 56

Query: 61 GKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHKVLK 98
          G +R  TG V FPV +  V F+ FKGEILE VV  V K
Sbjct: 57 GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNK 94