Miyakogusa Predicted Gene

Lj0g3v0128259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128259.1 Non Chatacterized Hit- tr|A5BCU5|A5BCU5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.74,2e-16,seg,NULL,CUFF.7720.1
         (205 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05470.1                                                       115   3e-26
Glyma11g31820.1                                                       108   3e-24
Glyma02g40570.1                                                       105   5e-23

>Glyma18g05470.1 
          Length = 625

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 117/213 (54%), Gaps = 26/213 (12%)

Query: 1   MGTCLSKKK---ESSPSTLIAEPNSATPPSKNS--SGNGDPLSNPKMGTE--PQANLXXX 53
           MG CLSKKK    ++  +  +  + A P  KN+  S +G  +S PK+ TE  P+  L   
Sbjct: 1   MGACLSKKKGSSSTATKSASSTAHVAVPELKNNPPSVSGVTVSKPKVETETAPEVKLNKD 60

Query: 54  XXXXXXXX------------XXIFIIKHRKSHDDGGERNSRSQQNAHQPFEEMHDRIAQS 101
                                 IFIIKHRKSHDD  ERNS S+  +    E M D+ A +
Sbjct: 61  NSKKVEEKHETVPEPEGHVKKEIFIIKHRKSHDDR-ERNSNSKSPSFTE-ESMADKTAPT 118

Query: 102 PAGAANMGVV-VRTSSCTKEEVDAILIQCGRLSRNSSGKQATXXXXXXXXXXXXXXXXXH 160
           P+   NMGVV VRTSSCTKEEVDAILIQCGRLSR SS   A                  +
Sbjct: 119 PS--TNMGVVGVRTSSCTKEEVDAILIQCGRLSR-SSSGNAAAAASGEHRRRYSGSKRSY 175

Query: 161 DFDHCDDNDTISTEEDQKEANTNVNRSDLCEDD 193
           DFDHC DNDT+S ++D K+AN N + SDLCE++
Sbjct: 176 DFDHC-DNDTVSNDDDSKKANANESNSDLCEEE 207


>Glyma11g31820.1 
          Length = 674

 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 103/218 (47%), Gaps = 35/218 (16%)

Query: 1   MGTCLSKKKESSPSTLIAEPNSATPPSKNSSGNGDPLSNPKMGTEPQANLXXXXXXXXXX 60
           MG CLSKKK SS +T  +  +S  P  KN+S    P S   +    + N+          
Sbjct: 1   MGACLSKKKGSSTATTKSAASSTVPELKNNS----PFSVSGVVNVSKPNVEEVKLKKDNS 56

Query: 61  --------------------XXXIFIIKHRKSHDDGGERNSRSQQNAHQPFEEMHDRIAQ 100
                                  IFIIKHRK+HDD   R   +  +   PF E    I  
Sbjct: 57  KKGKEEKKHETVPPEPEGHVKKEIFIIKHRKNHDDNNNRVRNNSNSKSPPFTE-ESTICD 115

Query: 101 SPAGAANMGVVV-----RTSSCTKEEVDAILIQCGRLSRNSSGKQATXXXXXXXXXXXXX 155
             A  ANMG        RTSSCTKEEVDAILIQCGRLSR+SSG                 
Sbjct: 116 KTAPTANMGGGGGGVGVRTSSCTKEEVDAILIQCGRLSRSSSGNAIA----AEHKRRYSG 171

Query: 156 XXXXHDFDHCDDNDTISTEEDQKEANTNVNRSDLCEDD 193
               +DFDHC DNDT+S ++D K+ N N + SDLCE++
Sbjct: 172 SKRSYDFDHC-DNDTVSNDDDSKKVNANESNSDLCEEE 208


>Glyma02g40570.1 
          Length = 470

 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/197 (42%), Positives = 102/197 (51%), Gaps = 43/197 (21%)

Query: 1   MGTCLSKKKESSPSTLIAEPNSATPPSKNSSGNGD-PLSNPKMGTEPQANLXXXXXXXXX 59
           MGTCLSKK  SS S     PN +    +NS  +    LS P   TEP+ +L         
Sbjct: 1   MGTCLSKKNGSSTS-----PNKSVSQHRNSENSVIVTLSKP---TEPELSLKNKTPQDEV 52

Query: 60  XXXXIFIIKHRKSHDDGGERNSRSQQNAHQPFEEMHDRIAQSPA----------GAANMG 109
               IFIIK R SHDD   R   +  +  QPF      IAQSPA             ++G
Sbjct: 53  KKE-IFIIKPRNSHDD---REKTTTTSKTQPF------IAQSPAPKQGDGTIAPSTPSIG 102

Query: 110 VV-VRTSSCTKEEVDAILIQCGRLSRNSSGKQATXXXXXXXXXXXXXXXXXHDFDHCDDN 168
           +V VRTSSCTKEEVD ILIQCGRLSR+SSG++ +                  DFDHC DN
Sbjct: 103 IVGVRTSSCTKEEVDEILIQCGRLSRSSSGRKYS------------GSKRSFDFDHC-DN 149

Query: 169 DTISTEEDQKEANTNVN 185
           DT S E+DQ+++  N N
Sbjct: 150 DTTSAEDDQRKSKGNGN 166