Miyakogusa Predicted Gene

Lj0g3v0128199.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128199.1 tr|B9GN43|B9GN43_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_551661 PE=3
SV=1,40.93,6e-18,seg,NULL,CUFF.7715.1
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g37800.1                                                       143   1e-34
Glyma14g36030.1                                                       138   3e-33
Glyma04g10080.1                                                       107   7e-24
Glyma06g10080.1                                                        60   1e-09

>Glyma02g37800.1 
          Length = 1297

 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/193 (48%), Positives = 119/193 (61%), Gaps = 21/193 (10%)

Query: 6    VQRTGNNPGIEEADKDRLLATQGAELLQGALSDRPAETNSDQAPRKPLSDIGNTQIKPNL 65
            V+  GN+  I+EADKDRLL  QGAELLQGAL + PAE +SD  PRKPLSDIGNT  K N 
Sbjct: 1094 VEGAGNDSSIDEADKDRLLVAQGAELLQGALVEGPAEVHSDHGPRKPLSDIGNTLAKSNA 1153

Query: 66   E---QR----KKLRKSTI--------ILVSDPPPSSQPEISNVRIPKKQNITKIYETNIA 110
            +   QR    KK  KST+        ++V D PP SQ +  N  +PKK+N   I E N++
Sbjct: 1154 QNANQRRKWAKKRNKSTVPVPVLTTNVVVPDTPPFSQSD--NSEVPKKEN-NSISEANVS 1210

Query: 111  ANSCRPQRKPPSRPENAACAPRAEANFVDPDSPVKRPSAARRAGSSNTGVPLWDRNAGKS 170
             N   PQ+   SRPENA  AP+ E + ++ D  +K P A R++ +   G+PL D NA K 
Sbjct: 1211 MNI--PQKIQSSRPENAPLAPKVEKSVIETDRWMKLPRAMRKSPNGG-GLPLGDMNASKP 1267

Query: 171  DESVSKEPENIEA 183
            DE V+KE E IEA
Sbjct: 1268 DEPVNKESEVIEA 1280


>Glyma14g36030.1 
          Length = 1292

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/190 (48%), Positives = 116/190 (61%), Gaps = 20/190 (10%)

Query: 6    VQRTGNNPGIEEADKDRLLATQGAELLQGALSDRPAETNSDQAPRKPLSDIGNTQIKPNL 65
            V+ TGN+  I+EADKD LLA QGAELLQGAL   PAE +SD  PRKPLSDIGNT  K N 
Sbjct: 1094 VEGTGNDSSIQEADKDHLLAAQGAELLQGALIGGPAEAHSDHGPRKPLSDIGNTLAKSNA 1153

Query: 66   EQ----------RKKLRKSTIILVSDPPPSSQPEISNVRIPKKQNITKIYETNIAANSCR 115
            ++          ++K   ST++L   PP SSQ +  N  +PKK+N   I E N+   S  
Sbjct: 1154 QKPNQRREWKNIKRKSTLSTVVLNVVPPTSSQSD--NSEVPKKEN-NSISEANV---SNI 1207

Query: 116  PQRKPPSRPENAACAPRAEANFVDPDSPVKRPSAARRAGSSN-TGVPLWDRNAGKSDESV 174
            PQ+   SRPEN    P+ E N ++PD  ++ P A R++ S N  G+PL D NA K DE V
Sbjct: 1208 PQKMHSSRPENVPVVPKVEKNVIEPD--IRLPRAMRKSVSPNGGGLPLGDMNASKPDEPV 1265

Query: 175  SKEPE-NIEA 183
            +KE E  IEA
Sbjct: 1266 NKESEVMIEA 1275


>Glyma04g10080.1 
          Length = 1207

 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/156 (46%), Positives = 86/156 (55%), Gaps = 32/156 (20%)

Query: 15   IEEADKDRLLATQGAELLQGALSDRPAETNSDQAPRKPLSDIGNTQIKPNLEQRK-KLRK 73
            IEE D   LL TQGAEL+QGAL DR  E NSD+  RKPLSDIGNTQ K N +    K + 
Sbjct: 1081 IEETD---LLVTQGAELIQGALVDRLDEINSDRGHRKPLSDIGNTQAKSNAKNGNPKKKT 1137

Query: 74   STIILVSDPPPSSQPEISNVRIPKKQNITKIYETNIAANSCRPQRKPPSRPENAACAPRA 133
            +T+I+V +PPPSSQ E + V IP                     RK   R EN       
Sbjct: 1138 ATVIIVPNPPPSSQAENTEVPIPI------------------HNRKFKFRKEN------- 1172

Query: 134  EANFVDPDSPVKRPSAARRAGSSN-TGVPLWDRNAG 168
              N  + + P+K P A RRA SSN +GVP W+RNA 
Sbjct: 1173 --NNSETNEPLKMPGAFRRAASSNSSGVPFWNRNAA 1206


>Glyma06g10080.1 
          Length = 314

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 30/38 (78%)

Query: 23  LLATQGAELLQGALSDRPAETNSDQAPRKPLSDIGNTQ 60
           LL TQGA LLQGAL DR  ETNS +  RKPLSDIGNTQ
Sbjct: 277 LLVTQGAGLLQGALVDRLDETNSGRGHRKPLSDIGNTQ 314