Miyakogusa Predicted Gene

Lj0g3v0127239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127239.1 Non Chatacterized Hit- tr|Q6Z2Y3|Q6Z2Y3_ORYSJ
Putative uncharacterized protein OJ1008_C03.26-2
OS=Or,73.08,6e-16,seg,NULL,CUFF.7659.1
         (326 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g14400.1                                                       256   2e-68
Glyma04g40370.1                                                       255   6e-68
Glyma04g40370.2                                                       253   2e-67

>Glyma06g14400.1 
          Length = 295

 Score =  256 bits (655), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 137/197 (69%), Positives = 146/197 (74%), Gaps = 5/197 (2%)

Query: 125 ESIHSIWNLTSDSESCHDHSPKREDHIDQVETSQQQISQILGEGERGDGISIGKDGXXXX 184
           ESIHSIW L+SDSES HDHSPKR DHIDQVETSQ +IS    EGE GDG+  G DG    
Sbjct: 1   ESIHSIWTLSSDSESFHDHSPKR-DHIDQVETSQHEISD---EGECGDGLVFGNDGKFPS 56

Query: 185 XXXXXXXXXXXQIDTEGCTPVXXXXXXXXXXXXDNDGDVEAAEEETFEKLVEPNVSSSML 244
                      QI  EG TPV             + GD++  EEET EK  EPNVSS+ L
Sbjct: 57  KKGSKEKSSQKQIHVEGHTPVKGKEIKASAKGKGS-GDLKVEEEETCEKPAEPNVSSARL 115

Query: 245 PLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDAPSGDKEMCLDLKGTIYKTSIV 304
           PLMLSEKV RTKALIECQGDSIDLSGDMGAVGRIIISD+PSGD+EMCLDLKGTIYKTSIV
Sbjct: 116 PLMLSEKVQRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMCLDLKGTIYKTSIV 175

Query: 305 PCRTFCVVSFGQSEAKV 321
           PCRTFCVVSFGQSEAKV
Sbjct: 176 PCRTFCVVSFGQSEAKV 192


>Glyma04g40370.1 
          Length = 371

 Score =  255 bits (651), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 169/322 (52%), Positives = 186/322 (57%), Gaps = 55/322 (17%)

Query: 1   MSSSRESSPDWLRSFQAPXXXXXXXXXXXXXXXXXXXXXNEDKTDGEGSSPKSPKLPKVN 60
           MSSSRESSPDWLRSFQ P                     NEDKTD EG+SPKSP+  KV 
Sbjct: 1   MSSSRESSPDWLRSFQVPSHSRLTLSSDSGSSRDGGSW-NEDKTDVEGASPKSPRFLKVT 59

Query: 61  K-NKSTPLAASSARSRKTLKVETLEIEDPTPPRRKKLDKLKENEGNSEEKKIMIESNVDK 119
           K N  TP AAS             ++E+ TP +RKK+DK K  EGN EEK+   ESN+DK
Sbjct: 60  KSNGKTPEAASP------------KVEEQTPSKRKKVDKKKPKEGNKEEKETANESNIDK 107

Query: 120 HIDHKESIHSIWNLTSDSESCHDHSPKREDHIDQVETSQQQISQILGEGERGDGISIGKD 179
           HIDHK                                      +I GEGE  DG+ +GK 
Sbjct: 108 HIDHKH-------------------------------------EISGEGECVDGLVLGK- 129

Query: 180 GXXXXXXXXXXXXXXXQIDTEGCTPVXXXXXXXXXXXXDNDGDVEAAEEETFEKLVEPNV 239
                           QID E  TPV               GD++  EEET EK  EPNV
Sbjct: 130 --SPSKKGSKEKSSQKQIDIEDHTPVKGKEIKASAKGK-GIGDLKVEEEETCEKPAEPNV 186

Query: 240 SSSMLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDAPSGDKEMCLDLKGTIY 299
           SS+ LPLMLSEKV RTKALIECQGDSIDLSGDMGAVGRIIISD+PSGD+EMCLDLKGTIY
Sbjct: 187 SSARLPLMLSEKVQRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMCLDLKGTIY 246

Query: 300 KTSIVPCRTFCVVSFGQSEAKV 321
           KTSIVPCRTFCVVSFGQSEAKV
Sbjct: 247 KTSIVPCRTFCVVSFGQSEAKV 268


>Glyma04g40370.2 
          Length = 306

 Score =  253 bits (646), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 169/322 (52%), Positives = 186/322 (57%), Gaps = 55/322 (17%)

Query: 1   MSSSRESSPDWLRSFQAPXXXXXXXXXXXXXXXXXXXXXNEDKTDGEGSSPKSPKLPKVN 60
           MSSSRESSPDWLRSFQ P                     NEDKTD EG+SPKSP+  KV 
Sbjct: 1   MSSSRESSPDWLRSFQVPSHSRLTLSSDSGSSRDGGSW-NEDKTDVEGASPKSPRFLKVT 59

Query: 61  K-NKSTPLAASSARSRKTLKVETLEIEDPTPPRRKKLDKLKENEGNSEEKKIMIESNVDK 119
           K N  TP AAS             ++E+ TP +RKK+DK K  EGN EEK+   ESN+DK
Sbjct: 60  KSNGKTPEAASP------------KVEEQTPSKRKKVDKKKPKEGNKEEKETANESNIDK 107

Query: 120 HIDHKESIHSIWNLTSDSESCHDHSPKREDHIDQVETSQQQISQILGEGERGDGISIGKD 179
           HIDHK                                      +I GEGE  DG+ +GK 
Sbjct: 108 HIDHKH-------------------------------------EISGEGECVDGLVLGKS 130

Query: 180 GXXXXXXXXXXXXXXXQIDTEGCTPVXXXXXXXXXXXXDNDGDVEAAEEETFEKLVEPNV 239
                           QID E  TPV               GD++  EEET EK  EPNV
Sbjct: 131 ---PSKKGSKEKSSQKQIDIEDHTPVKGKEIKASAKGK-GIGDLKVEEEETCEKPAEPNV 186

Query: 240 SSSMLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDAPSGDKEMCLDLKGTIY 299
           SS+ LPLMLSEKV RTKALIECQGDSIDLSGDMGAVGRIIISD+PSGD+EMCLDLKGTIY
Sbjct: 187 SSARLPLMLSEKVQRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMCLDLKGTIY 246

Query: 300 KTSIVPCRTFCVVSFGQSEAKV 321
           KTSIVPCRTFCVVSFGQSEAKV
Sbjct: 247 KTSIVPCRTFCVVSFGQSEAKV 268