Miyakogusa Predicted Gene
- Lj0g3v0126949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0126949.1 Non Chatacterized Hit- tr|I1M638|I1M638_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,83.19,0,NIEMANN-PICK C1,NULL; PATCHED-RELATED,NULL;
seg,NULL,CUFF.7666.1
(582 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g00400.1 892 0.0
Glyma02g48070.1 839 0.0
Glyma06g02020.1 715 0.0
Glyma04g01900.1 263 5e-70
Glyma05g17420.1 56 1e-07
Glyma18g36020.1 55 2e-07
>Glyma14g00400.1
Length = 680
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/571 (77%), Positives = 473/571 (82%), Gaps = 29/571 (5%)
Query: 37 HSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQFDT 96
HS EYCAMYDICGQ SDGK LNCPY SPSVKP DLLSAKIQSLCPTITGNVCCT +QFDT
Sbjct: 3 HSEEYCAMYDICGQSSDGKALNCPYGSPSVKPDDLLSAKIQSLCPTITGNVCCTADQFDT 62
Query: 97 LRVQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYV 156
LRVQ AVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSIS+V+GNMTVDGID Y+
Sbjct: 63 LRVQ---AVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISEVNGNMTVDGIDYYI 119
Query: 157 TETFGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFK 216
TETFGEGLY +CKDVKFGTMNTRAIDFVGAGA+N+KEWFAFLGQKVPPGFPGSPYSI FK
Sbjct: 120 TETFGEGLYESCKDVKFGTMNTRAIDFVGAGASNFKEWFAFLGQKVPPGFPGSPYSILFK 179
Query: 217 TTILDSSPMELMNASVYSCNDTSLGXXXXXXXXXXXXXXXXXXXXXXXXXXIKMGSLKVR 276
TTILDSSPM+LMNASVYSCNDTSLG I++GSLKVR
Sbjct: 180 TTILDSSPMKLMNASVYSCNDTSLGCSCGDCPSSPVCSGSEPSPPRKDPCSIRIGSLKVR 239
Query: 277 CVDLSLAVLYIVLVFVLFGWIXXXXXXXXXXXGSSAEPLL---VSEGRSFTNLPKDG--- 330
CVD S+A+LYIVLVFVLFGW GS EPLL V EG SF NL KDG
Sbjct: 240 CVDFSMAILYIVLVFVLFGWALLQRTRGRRRLGSGVEPLLDDMVDEGSSFANLQKDGTHP 299
Query: 331 -----EVLVIDPQ---------------RQNEVQYSFIQEWLSNFYRAYGRWAARRPTIV 370
+++ + QN VQ+SF+Q LS+FYR YGRWA R+PTIV
Sbjct: 300 AEGLGSYFLLNKKFIEDLGVLGNTVYTCWQNVVQFSFVQGCLSSFYRTYGRWATRKPTIV 359
Query: 371 LCSSLAIVILLCFGLLRFNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATL 430
LCSSL IV+LLC GLLRF VETRPEKLWVGP SKAAEEKEFFDSHLAPFYRIEQLIIAT+
Sbjct: 360 LCSSLTIVVLLCLGLLRFEVETRPEKLWVGPGSKAAEEKEFFDSHLAPFYRIEQLIIATI 419
Query: 431 PESEHGKPPSIVTDDNIELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQ 490
PES+HGKPPSI+T++NIELLFEIQEKVD IRANYSGLLVSLSDICLKPLG+DCA+QSILQ
Sbjct: 420 PESKHGKPPSIITEENIELLFEIQEKVDGIRANYSGLLVSLSDICLKPLGDDCASQSILQ 479
Query: 491 YFQMDPDNFDNYGGVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFI 550
YFQMDPDN+DNYGGVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAF+
Sbjct: 480 YFQMDPDNYDNYGGVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFV 539
Query: 551 ITYPVNNALTKVGDENGKAIAWEKAFIQLAK 581
ITYPVNNA+TKVGDENGKAIAWEKAFIQLAK
Sbjct: 540 ITYPVNNAITKVGDENGKAIAWEKAFIQLAK 570
>Glyma02g48070.1
Length = 1194
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/541 (77%), Positives = 443/541 (81%), Gaps = 35/541 (6%)
Query: 44 MYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQFDTLRVQVQQ 103
MYDICGQRSDGK LNCPY SPSVKP DLLSAKIQSLCPTITGNVCCT +QFDTLRVQ
Sbjct: 1 MYDICGQRSDGKALNCPYGSPSVKPDDLLSAKIQSLCPTITGNVCCTADQFDTLRVQ--- 57
Query: 104 AVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYVTETFGEG 163
AVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSIS+VDGN TVDGID ++TETFG+G
Sbjct: 58 AVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISEVDGNTTVDGIDYHLTETFGQG 117
Query: 164 LYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFKTTILDSS 223
LY +CKDVKFGTMNTRAIDFVGAGA+N+KEW FLGQKVPPGFPGSPYSI FKT ILDSS
Sbjct: 118 LYESCKDVKFGTMNTRAIDFVGAGASNFKEWAEFLGQKVPPGFPGSPYSILFKTAILDSS 177
Query: 224 PMELMNASVYSCNDTSLGXXXXXXXXXXXXXXXXXXXXXXXXXXIKMGSLKVRCVDLSLA 283
PM+LMNASVYSCNDTSLG I +GSLKVRCVD S+A
Sbjct: 178 PMKLMNASVYSCNDTSLGCSCGDCPSSPVCSGSEPSPPRKDPCSIGIGSLKVRCVDFSIA 237
Query: 284 VLYIVLVFVLFGWIXXXXXXXXXXXGSSAEPLL---VSEGRSFTNLPKDGEVLVIDPQRQ 340
+LYIVLVFVLFGW GSSAEPLL V EG +
Sbjct: 238 ILYIVLVFVLFGWALLQRTRGRRRLGSSAEPLLDDMVGEGMA------------------ 279
Query: 341 NEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCFGLLRFNVETRPEKLWVG 400
L+ R YGRWAAR+PTIVLCSSLAIV+LLC GLLRF VETRPEKLWVG
Sbjct: 280 -----------LAVLARTYGRWAARKPTIVLCSSLAIVVLLCLGLLRFEVETRPEKLWVG 328
Query: 401 PESKAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVTDDNIELLFEIQEKVDEI 460
P SKAAEEKEFFDSHLAPFYRIEQLIIAT+PES+HGKPPSI+T++NIELLFEIQEKVD I
Sbjct: 329 PGSKAAEEKEFFDSHLAPFYRIEQLIIATIPESKHGKPPSIITEENIELLFEIQEKVDGI 388
Query: 461 RANYSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYGGVEHAEYCFQHYTSTET 520
RANYSG LVSLSDICLKPLG+DCATQSILQYFQMDPDN+DNYGGVEHAEYCFQHYTSTET
Sbjct: 389 RANYSGFLVSLSDICLKPLGDDCATQSILQYFQMDPDNYDNYGGVEHAEYCFQHYTSTET 448
Query: 521 CFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVGDENGKAIAWEKAFIQLA 580
CFSAFKAPLEPTTALGGFSGNNYSEASAF+ITYPVNNA+TKVG ENGKAIAWEKAFIQLA
Sbjct: 449 CFSAFKAPLEPTTALGGFSGNNYSEASAFVITYPVNNAITKVGGENGKAIAWEKAFIQLA 508
Query: 581 K 581
K
Sbjct: 509 K 509
>Glyma06g02020.1
Length = 1292
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/554 (61%), Positives = 416/554 (75%), Gaps = 9/554 (1%)
Query: 37 HSNEYCAMYDICGQRSDGKVLNCPYPSPSVKPHDLLSAKIQSLCPTITGNVCCTEEQFDT 96
HS +YCAMYDICG RSDGKV+NCP+ SP+VKP DLLS+KIQSLCPTITGNVCCTE QF+T
Sbjct: 45 HSEDYCAMYDICGTRSDGKVVNCPHGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFET 104
Query: 97 LRVQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISQVDGNMTVDGIDLYV 156
LR QVQQA+P LVGCPACLRNFLNLFCEL+CSPNQSLFINVTS+ V GN TV GID +V
Sbjct: 105 LRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDNVSGNSTVGGIDYFV 164
Query: 157 TETFGEGLYSACKDVKFGTMNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFK 216
T+ FGEGLY +CK+VKFGTMN+RA+ F+GAGA N+K+WFAF+G+K P GSPY+I F+
Sbjct: 165 TDAFGEGLYESCKEVKFGTMNSRALQFIGAGAQNFKDWFAFIGRKAAPHGLGSPYAITFR 224
Query: 217 TTILDSSPMELMNASVYSCNDTSLGXXXXXX-XXXXXXXXXXXXXXXXXXXXIKMGSLKV 275
+SS M+ MN S YSC D SLG +K+G+L V
Sbjct: 225 PNATESSDMKPMNVSTYSCGDISLGCSCGDCPSSSVCSSSASTTTNKKDSCSVKIGTLMV 284
Query: 276 RCVDLSLAVLYIVLVFVLFGW-IXXXXXXXXXXXGSSAEPLLVSEGRSFT-------NLP 327
+CVDL LAVLY++L+ V GW + + + ++S+G ++ N+P
Sbjct: 285 KCVDLILAVLYVILICVFLGWGLYHRIRERKPTYRTKSMSNVISDGALYSHSREKDENVP 344
Query: 328 KDGEVLVIDPQRQNEVQYSFIQEWLSNFYRAYGRWAARRPTIVLCSSLAIVILLCFGLLR 387
++ Q +N V+ S +Q +++NFYR YG + AR P +VL SSLAIV+LLC GL++
Sbjct: 345 MQIHMMEDAQQNRNRVRLSAVQGYMTNFYRKYGSYVARHPIMVLASSLAIVLLLCLGLIQ 404
Query: 388 FNVETRPEKLWVGPESKAAEEKEFFDSHLAPFYRIEQLIIATLPESEHGKPPSIVTDDNI 447
F VETRPEKLWVGP SKAA+EK+FFD+HLAPFYRIEQLI+AT+P++ + P IVT+DNI
Sbjct: 405 FKVETRPEKLWVGPGSKAAQEKQFFDTHLAPFYRIEQLILATVPDNVNSTSPRIVTEDNI 464
Query: 448 ELLFEIQEKVDEIRANYSGLLVSLSDICLKPLGEDCATQSILQYFQMDPDNFDNYGGVEH 507
LFEIQ+KVD IRANYSGL VSL DIC+KPL +DCATQS+LQYF+MDP NFD+YGGVEH
Sbjct: 465 RFLFEIQKKVDAIRANYSGLTVSLQDICMKPLDKDCATQSVLQYFKMDPKNFDDYGGVEH 524
Query: 508 AEYCFQHYTSTETCFSAFKAPLEPTTALGGFSGNNYSEASAFIITYPVNNALTKVGDENG 567
YCF+HY+S + C SAFKAPL+P+T LGGFSGN+YSEASAFI+TYPVNNA+ K G+
Sbjct: 525 LNYCFEHYSSADRCMSAFKAPLDPSTVLGGFSGNDYSEASAFIVTYPVNNAINKEGNGTR 584
Query: 568 KAIAWEKAFIQLAK 581
KA+AWEK FIQL K
Sbjct: 585 KAVAWEKTFIQLVK 598
>Glyma04g01900.1
Length = 772
Score = 263 bits (672), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 160/223 (71%), Gaps = 26/223 (11%)
Query: 359 YGRWAARRPTIVLCSSLAIVILLCFGLLRFNVETRPEKLWVGPESKAAEEKEFFDSHLAP 418
Y R R+PT + ++ ++ GL+RF VETRPEKLWVGP SKAA+EK+FFD+HLAP
Sbjct: 125 YHRIRERKPTY---RTKSVSNVISDGLIRFKVETRPEKLWVGPGSKAAQEKQFFDTHLAP 181
Query: 419 FYRIEQLIIATLPESEHGKPPSIVTDDNIELLFEIQEKVDEIRANYSGLLVSLSDICLKP 478
FYRIEQLI+AT+P+ + IV++DNI LFEIQ+KVD IRANYSGL VSL DIC+KP
Sbjct: 182 FYRIEQLILATVPDHVNSTSTRIVSEDNIRFLFEIQKKVDAIRANYSGLTVSLQDICMKP 241
Query: 479 LGEDCATQSILQYFQMDPDNFDNYGGVEHAEYCFQHYTSTETCFSAFKAPLEPTTALGGF 538
L +DCATQS+L QHY+S + C SAFKAPL+P+T LGGF
Sbjct: 242 LDKDCATQSVL-----------------------QHYSSADHCMSAFKAPLDPSTVLGGF 278
Query: 539 SGNNYSEASAFIITYPVNNALTKVGDENGKAIAWEKAFIQLAK 581
SGN+YSEASAFI+TYP+NNA+ + G+ KA+AWEK FIQL K
Sbjct: 279 SGNDYSEASAFIVTYPINNAINEEGNGTRKAVAWEKTFIQLVK 321
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 99/205 (48%), Gaps = 2/205 (0%)
Query: 176 MNTRAIDFVGAGANNYKEWFAFLGQKVPPGFPGSPYSIDFKTTILDSSPMELMNASVYSC 235
MN+RA+ F+GAGA NYK+WF+F+G+K P GSPY+I F SS M+ MN S YSC
Sbjct: 1 MNSRALQFIGAGAQNYKDWFSFIGRKAAPHGLGSPYAITFWPNATASSDMKPMNVSTYSC 60
Query: 236 NDTSLG-XXXXXXXXXXXXXXXXXXXXXXXXXXIKMGSLKVRCVDLSLAVLYIVLVFVLF 294
D SLG +K+G+L V+CVDLSLAVLYI+L+ V
Sbjct: 61 GDISLGCSCGDCPSSSVCSNSASTTTNKKDSCSVKVGTLMVKCVDLSLAVLYIILICVFL 120
Query: 295 GW-IXXXXXXXXXXXGSSAEPLLVSEGRSFTNLPKDGEVLVIDPQRQNEVQYSFIQEWLS 353
GW + + + ++S+G + E L + P + + F L+
Sbjct: 121 GWGLYHRIRERKPTYRTKSVSNVISDGLIRFKVETRPEKLWVGPGSKAAQEKQFFDTHLA 180
Query: 354 NFYRAYGRWAARRPTIVLCSSLAIV 378
FYR A P V +S IV
Sbjct: 181 PFYRIEQLILATVPDHVNSTSTRIV 205
>Glyma05g17420.1
Length = 185
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 359 YGRWAARRPTIVLCSSLAIVILLCFGLLRFNVETRPEKL 397
YG + R P +VL SSLAIV+LL GL+RF VETRPEK+
Sbjct: 57 YGSYVVRHPIMVLASSLAIVLLLYLGLIRFKVETRPEKV 95
>Glyma18g36020.1
Length = 135
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 545 EASAFIITYPVNNALTKVGDENGKAIAWEKAFIQLAK 581
+ASAFI+TYP+NNA+ + G+ KA+AWEK FIQL K
Sbjct: 1 QASAFIVTYPLNNAINEEGNGTRKAVAWEKTFIQLVK 37