Miyakogusa Predicted Gene

Lj0g3v0126919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126919.1 Non Chatacterized Hit- tr|A5ADR4|A5ADR4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,60.32,0.000000000003,seg,NULL,CUFF.7636.1
         (241 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g35730.1                                                       274   6e-74
Glyma12g34860.1                                                       270   7e-73
Glyma12g34860.2                                                       153   1e-37

>Glyma13g35730.1 
          Length = 244

 Score =  274 bits (701), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 154/241 (63%), Positives = 170/241 (70%), Gaps = 11/241 (4%)

Query: 6   TTPVKFS---TNLKPSFFHDGLLYKRPMFCFSHLETTKCNSSLRSSSFKPRAYRERWSFL 62
           TT V+FS   +NLKP+FFH G+ YKRP   FS +ET     S   ++ K  A R    FL
Sbjct: 2   TTLVQFSIKCSNLKPNFFHHGI-YKRPTRSFSRIETKF--GSFNGNNLKLTAGRVSLFFL 58

Query: 63  GAGAVFKNGGLLEEK---RSKRVVLVKNFDLNSXXXXXXXXXXXXXXXTARLWGNIAVAI 119
           G G VFKNG L EEK   R KRVVLVKN +                  TAR+ GN+A+AI
Sbjct: 59  G-GEVFKNGVLWEEKGCKRKKRVVLVKN-NQGFGFNGGGGGGGRDDGATARILGNLALAI 116

Query: 120 GLTYLSFTGQLGWILDAXXXXXXXXXXXXXXGLGAFLWWAGRDIMQGTCPNCGNDFQVFK 179
           GLTYLS TGQLGWILDA              GLGAFLWWAGRDIMQGTCPNCGNDFQVFK
Sbjct: 117 GLTYLSMTGQLGWILDAIVSIWLVAVLIPIVGLGAFLWWAGRDIMQGTCPNCGNDFQVFK 176

Query: 180 STLNDDLQLCPYCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNNFSRSSNEKDSGRAIDV 239
           S+LNDDLQLCP+CGQPFSVVGNEFVKDSVKFSNQ+TTFGQAFNNF+RS  EKDSG+AIDV
Sbjct: 177 SSLNDDLQLCPFCGQPFSVVGNEFVKDSVKFSNQTTTFGQAFNNFTRSRKEKDSGKAIDV 236

Query: 240 E 240
           E
Sbjct: 237 E 237


>Glyma12g34860.1 
          Length = 240

 Score =  270 bits (691), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 153/238 (64%), Positives = 166/238 (69%), Gaps = 9/238 (3%)

Query: 6   TTPVKFS---TNLKPSFFHDGLLYKRPMFCFSHLETTKCNSSLRSSSFKPRAYRERWSFL 62
           TT V+FS   +NLK +FFH G+ YKRP   FS +ET     S   +S K R  RE   FL
Sbjct: 2   TTLVQFSIKCSNLKHNFFHHGI-YKRPTCSFSRIETKF--GSFNGNSLKLRVGRESLCFL 58

Query: 63  GAGAVFKNGGLLEEKRSKRVVLVKNFDLNSXXXXXXXXXXXXXXXTARLWGNIAVAIGLT 122
           G GAVFKNG     KR KR VLVKN                    TAR+ GN+A+AIGLT
Sbjct: 59  G-GAVFKNGEEKGCKREKRAVLVKN--NQGFGFNGGGGGGRDDGATARILGNLALAIGLT 115

Query: 123 YLSFTGQLGWILDAXXXXXXXXXXXXXXGLGAFLWWAGRDIMQGTCPNCGNDFQVFKSTL 182
           YLS TGQLGWILDA              GLGAFL WAGRDIMQGTCPNCGNDFQVFKS+L
Sbjct: 116 YLSMTGQLGWILDAIVSIWLIAVLIPIVGLGAFLLWAGRDIMQGTCPNCGNDFQVFKSSL 175

Query: 183 NDDLQLCPYCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNNFSRSSNEKDSGRAIDVE 240
           NDDLQLCP+CGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNNF+RS NEKDSG+AIDVE
Sbjct: 176 NDDLQLCPFCGQPFSVVGNEFVKDSVKFSNQSTTFGQAFNNFTRSRNEKDSGKAIDVE 233


>Glyma12g34860.2 
          Length = 172

 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/177 (54%), Positives = 106/177 (59%), Gaps = 9/177 (5%)

Query: 6   TTPVKFS---TNLKPSFFHDGLLYKRPMFCFSHLETTKCNSSLRSSSFKPRAYRERWSFL 62
           TT V+FS   +NLK +FFH G+ YKRP   FS +ET     S   +S K R  RE   FL
Sbjct: 2   TTLVQFSIKCSNLKHNFFHHGI-YKRPTCSFSRIETK--FGSFNGNSLKLRVGRESLCFL 58

Query: 63  GAGAVFKNGGLLEEKRSKRVVLVKNFDLNSXXXXXXXXXXXXXXXTARLWGNIAVAIGLT 122
           G GAVFKNG     KR KR VLVKN                    TAR+ GN+A+AIGLT
Sbjct: 59  G-GAVFKNGEEKGCKREKRAVLVKN--NQGFGFNGGGGGGRDDGATARILGNLALAIGLT 115

Query: 123 YLSFTGQLGWILDAXXXXXXXXXXXXXXGLGAFLWWAGRDIMQGTCPNCGNDFQVFK 179
           YLS TGQLGWILDA              GLGAFL WAGRDIMQGTCPNCGNDFQVFK
Sbjct: 116 YLSMTGQLGWILDAIVSIWLIAVLIPIVGLGAFLLWAGRDIMQGTCPNCGNDFQVFK 172