Miyakogusa Predicted Gene

Lj0g3v0126879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0126879.1 Non Chatacterized Hit- tr|I3SQ61|I3SQ61_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,86.61,0,coiled-coil,NULL; 60S RIBOSOMAL PROTEIN L30-LIKE
PROTEIN,NULL; 60S RIBOSOMAL PROTEIN L24,Ribosomal p,CUFF.7632.1
         (135 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g09090.1                                                       170   3e-43
Glyma11g19410.1                                                       169   8e-43
Glyma12g30680.2                                                       162   7e-41
Glyma12g30680.1                                                       162   7e-41
Glyma17g05270.1                                                       161   1e-40
Glyma10g09780.1                                                       124   2e-29
Glyma11g19410.2                                                       116   6e-27
Glyma19g37370.1                                                        52   2e-07
Glyma19g37370.2                                                        52   2e-07
Glyma03g34700.1                                                        51   3e-07
Glyma13g21520.1                                                        51   4e-07
Glyma10g07680.1                                                        51   4e-07
Glyma13g21520.2                                                        51   4e-07

>Glyma12g09090.1 
          Length = 168

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 84/119 (70%), Positives = 96/119 (80%)

Query: 13  GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
           GHGIQFVRNDAKIFRF RSKCHKNFKMKRNPRKVKWTKAYRRVHGK+MT+  TFEFERKR
Sbjct: 16  GHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKR 75

Query: 73  NRPERYDRNVKEDVLXXXXXXXXXXXSREETHHKKMKQGKNEKQRREAEKELKQGINMV 131
           NRPERYDRN+ E+VL           +REE HHK   +GK +K + EA +EL+QGI++V
Sbjct: 76  NRPERYDRNLAENVLKAIPKIDKIRVTREEKHHKNRMKGKKQKLQMEAARELEQGISLV 134


>Glyma11g19410.1 
          Length = 169

 Score =  169 bits (428), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 85/127 (66%), Positives = 97/127 (76%)

Query: 5   FFNCIPGSGHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQ 64
           F +     GHGIQFVRNDAKIFRF RSKCHKNFKMKRNPRKVKWTKAYRRVHGK+MT+  
Sbjct: 8   FCSSTTYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDS 67

Query: 65  TFEFERKRNRPERYDRNVKEDVLXXXXXXXXXXXSREETHHKKMKQGKNEKQRREAEKEL 124
           TFEFERKRNRPERYDRN+ E+VL           +REE HHK   +GK +K   EA +EL
Sbjct: 68  TFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVAREEKHHKNRMKGKKQKLHMEAVREL 127

Query: 125 KQGINMV 131
           +QGI++V
Sbjct: 128 EQGISLV 134


>Glyma12g30680.2 
          Length = 168

 Score =  162 bits (411), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 87/119 (73%), Positives = 96/119 (80%)

Query: 13  GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
           GHGIQFVRNDAKIFRF RSKCHKNFKMKRNPRKVKWTKAYRRVHGK+MT+  TFEFERKR
Sbjct: 16  GHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKR 75

Query: 73  NRPERYDRNVKEDVLXXXXXXXXXXXSREETHHKKMKQGKNEKQRREAEKELKQGINMV 131
           NRPERYDRN+ E+VL           SREE HHK   +GK EK  +EA KEL+QGI++V
Sbjct: 76  NRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKEKLLKEAVKELEQGISLV 134


>Glyma12g30680.1 
          Length = 168

 Score =  162 bits (411), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 87/119 (73%), Positives = 96/119 (80%)

Query: 13  GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
           GHGIQFVRNDAKIFRF RSKCHKNFKMKRNPRKVKWTKAYRRVHGK+MT+  TFEFERKR
Sbjct: 16  GHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKR 75

Query: 73  NRPERYDRNVKEDVLXXXXXXXXXXXSREETHHKKMKQGKNEKQRREAEKELKQGINMV 131
           NRPERYDRN+ E+VL           SREE HHK   +GK EK  +EA KEL+QGI++V
Sbjct: 76  NRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNRMKGKKEKLLKEAVKELEQGISLV 134


>Glyma17g05270.1 
          Length = 168

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 87/127 (68%), Positives = 98/127 (77%)

Query: 5   FFNCIPGSGHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQ 64
           F +     GHGIQFVRNDAKIFRF RSKCHKNFKMKRNPRKVKWTKAYRRVHGK+MT+  
Sbjct: 8   FCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDS 67

Query: 65  TFEFERKRNRPERYDRNVKEDVLXXXXXXXXXXXSREETHHKKMKQGKNEKQRREAEKEL 124
           TFEFERKRNRPERYDRN+ E+VL           +REE HHK   +GK EK  +EA KEL
Sbjct: 68  TFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLLKEAVKEL 127

Query: 125 KQGINMV 131
           +QGI++V
Sbjct: 128 EQGISLV 134


>Glyma10g09780.1 
          Length = 206

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/107 (63%), Positives = 76/107 (71%), Gaps = 7/107 (6%)

Query: 13  GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRR----VHGKEMTRI--QTF 66
           GHGIQFVRNDAKIFRF RSKCHKNFKMKRNPRKVKWTKAYR     ++   +  +  + F
Sbjct: 16  GHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRNYLDIIYLLNLIAVIWENF 75

Query: 67  E-FERKRNRPERYDRNVKEDVLXXXXXXXXXXXSREETHHKKMKQGK 112
             FERKRNRPERYDRN+ E+VL           SREE HHK  K+GK
Sbjct: 76  TVFERKRNRPERYDRNLAENVLKAIPKIDKIRVSREERHHKNKKKGK 122


>Glyma11g19410.2 
          Length = 128

 Score =  116 bits (291), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 70/93 (75%)

Query: 39  MKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKRNRPERYDRNVKEDVLXXXXXXXXXXX 98
           MKRNPRKVKWTKAYRRVHGK+MT+  TFEFERKRNRPERYDRN+ E+VL           
Sbjct: 1   MKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRV 60

Query: 99  SREETHHKKMKQGKNEKQRREAEKELKQGINMV 131
           +REE HHK   +GK +K   EA +EL+QGI++V
Sbjct: 61  AREEKHHKNRMKGKKQKLHMEAVRELEQGISLV 93


>Glyma19g37370.1 
          Length = 164

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 13 GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
          G GI+FVR D+++F F  SKC + F  +  P K+ WT  YR+ H K++ +    E  RKR
Sbjct: 18 GKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQ----EAVRKR 73

Query: 73 NRPER--YDRNVKEDVL 87
           R  +  Y R++    L
Sbjct: 74 RRAAKKPYSRSIVGATL 90


>Glyma19g37370.2 
          Length = 151

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 13 GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
          G GI+FVR D+++F F  SKC + F  +  P K+ WT  YR+ H K++ +    E  RKR
Sbjct: 18 GKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQ----EAVRKR 73

Query: 73 NRPER--YDRNVKEDVL 87
           R  +  Y R++    L
Sbjct: 74 RRAAKKPYSRSIVGATL 90


>Glyma03g34700.1 
          Length = 163

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 13 GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
          G GI+FVR D+++F F  SKC + F  +  P K+ WT  YR+ H K++   Q    +R+R
Sbjct: 18 GKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA--QEAVKKRRR 75

Query: 73 NRPERYDRNVKEDVL 87
             + Y R++    L
Sbjct: 76 AAKKPYSRSIVGATL 90


>Glyma13g21520.1 
          Length = 164

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 13 GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
          G GI+FVR D+++F F  SKC + F  +  P K+ WT  YR+ H K++   Q    +R+R
Sbjct: 18 GKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA--QEAVKKRRR 75

Query: 73 NRPERYDRNVKEDVL 87
             + Y R++    L
Sbjct: 76 ATKKPYSRSIVGATL 90


>Glyma10g07680.1 
          Length = 163

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 13 GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
          G GI+FVR D+++F F  SKC + F  +  P K+ WT  YR+ H K++   Q    +R+R
Sbjct: 18 GKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA--QEAVKKRRR 75

Query: 73 NRPERYDRNVKEDVL 87
             + Y R++    L
Sbjct: 76 AAKKPYSRSIVGATL 90


>Glyma13g21520.2 
          Length = 121

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 13 GHGIQFVRNDAKIFRFYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKEMTRIQTFEFERKR 72
          G GI+FVR D+++F F  SKC + F  +  P K+ WT  YR+ H K++   Q    +R+R
Sbjct: 18 GKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA--QEAVKKRRR 75

Query: 73 NRPERYDRNVKEDVL 87
             + Y R++    L
Sbjct: 76 ATKKPYSRSIVGATL 90